Gene Ndas_4787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4787 
Symbol 
ID9248670 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5673867 
End bp5674649 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content76% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003682677 
Protein GI297563703 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0669057 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCGG CCGAGTTCAC CGGGGTGAGC CGCCACTACC CCGGCGGTGT ACGGGCCCTG 
GACGGGGTGG ACCTGGTCGT GGGCCGCGGC GAGATGCTGG CGATCGTGGG CCCCTCGGGC
TCGGGCAAGT CCACCCTGCT CAACCTGCTC GGCACCCTGG ACGCGCCGAC CTCGGGCACG
GTGCGCGTGT TCGGGCACGA TGTGGGGTCC CTGCGCGACG ACGAGCTGTC CGCGCTGCGG
GCACGCTCGG TCGGTTTCGT CTTCCAGCAG TTCCACCTGG CGCCCAACGT GCGGGCCGTG
GACAACGTGG CCGAGGGCCT GCTGTACTCC GGCGCGTCCA GACGCGAGCG CGGGCGCCGT
GCGCTGCGGG CGCTGGAGCG CGTCGGGCTG ACCGACCGCG CCGGCCACCG GCCGCACGAG
CTGTCCGGCG GGCAGAGGCA GCGCGTGGCG ATCGCCCGCG CTGTGGCCTC CTCCCCCCGG
ATGCTGCTGG CCGACGAGCC GACCGGGGCT CTGGACTCGG CCTCGGGCGC GGCCGTGATG
GAACTGCTCG GCGAGCTGCA CCGGGACGGG GTGACCGTGG TCGTGATCAC GCACGACAGG
GAGTTGGCCG CGGGTCTGCC GAGACGGGTG GAGGTGCACG ACGGCCGGAT CGTCGCCGAC
TCCGGTCGCC CGGTCCCGGT GGACACGGGT GCCGACGGCG CGGCGGGGAC GGACGGCTCC
GCGCGGCCCC GCGACGCGGC GCGGACGGGC TCCGCAGGAC CCCGGGCCAA GGGGGTCCGG
TGA
 
Protein sequence
MNAAEFTGVS RHYPGGVRAL DGVDLVVGRG EMLAIVGPSG SGKSTLLNLL GTLDAPTSGT 
VRVFGHDVGS LRDDELSALR ARSVGFVFQQ FHLAPNVRAV DNVAEGLLYS GASRRERGRR
ALRALERVGL TDRAGHRPHE LSGGQRQRVA IARAVASSPR MLLADEPTGA LDSASGAAVM
ELLGELHRDG VTVVVITHDR ELAAGLPRRV EVHDGRIVAD SGRPVPVDTG ADGAAGTDGS
ARPRDAARTG SAGPRAKGVR