Gene Ndas_4786 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4786 
Symbol 
ID9248669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5672740 
End bp5673870 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content75% 
IMG OID 
ProductPeptidoglycan-binding domain 1 protein 
Protein accessionYP_003682676 
Protein GI297563702 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0569189 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCGCCG ACACCGCGCT CCTCCCCGAG GAGGAGCGGG AGGAGGAGCG GCCGCCCCGC 
CGCTGGTTCG GTCCGCTGTG GCTGGGCGCG GCGCTGCTCA CCCTCGTGCT CCTGTGCGTC
GTGGCGTGGG CGGCCGTGCG AGGACTGCCG GGGGGTTCCG CGGACGGTGA GGCTCCCGAC
CCCGGACCGA CGGCGCGGAT CGAACGCACC ACGCTGCTGC GCGAGGAGAA CCTCGACGGC
GCCCTGGGGT ACGCGGGCGG GGGCACGTTC TTCGCCCGCT CCGACGGCGT GGTCACCCGG
CTGCCCGGGG TGGGCTCCGA ACTGACCGCG GGCGACCTCG CCTGGGAGAT CGACGGCAGG
CCCACGGTCC TGCTGCGCGG GGACAGGCCC GCCTACCGGC CGCTGGAACC GGGGAGCAGC
GGCGAGGACG TGCGCCAGTT CGAGCGGGCG CTGGCCGAAC TGGGCTACTC GGGCTTCACC
GTGGACGACG AGTACACGTG GCTGACCGCC GAGGCCGTCC GTCGCTGGCA GGACGACACC
GAGGGCATGG AGGTCACCGG CGAGGTGCAC CCCTCCCAGA TCTGGTACAC GTCCGGCGCG
GTGCGGGTGA CCGGGCACGA GGTGGACGTC AGCGCGGGCG TCGCGCCCGC GACGGCGCTG
CTGACCACCA GTTCCACCCG CCAGGTCGTG CGTGTGGACC TGGCCGTCGG CGACCGCGAC
CTGCTCACCG AGGACGCCGG GGTCACCGTC CAACTGCCCG GCGGGGAGAG CGTCGCCGGA
GTGGTGGAGA GCGTCGGCAC CGTCGCCAGC GTCGAGGAGG GCGAGGAGGG CGCGGGCGGG
GGCGGCGACC CCACCGTGGA GGTGGTCATC GACCTGGAGG AGGACCCCGC GGGCTTCCTC
GACCAGGCAC CGGTCACCGT GGTCGCCCGC GGGGAGTCGC GGGAGGACGT GCTGGCCGCG
CCGGTGGGCG CGCTGATCGC GCTGCCCGGG GACCGCTACG GACTGTCCGT GGTGGACGCG
GACGGCACCG TGCGCGACGT GCCGGTGGAG ACGGGCTGGT TCTCGGACGG CCGGGTGGAG
GTCAGCGGCG AGGGGATCGG CGAGGGCACC GAGGTGGTGG TCCCCGAATG A
 
Protein sequence
MSADTALLPE EEREEERPPR RWFGPLWLGA ALLTLVLLCV VAWAAVRGLP GGSADGEAPD 
PGPTARIERT TLLREENLDG ALGYAGGGTF FARSDGVVTR LPGVGSELTA GDLAWEIDGR
PTVLLRGDRP AYRPLEPGSS GEDVRQFERA LAELGYSGFT VDDEYTWLTA EAVRRWQDDT
EGMEVTGEVH PSQIWYTSGA VRVTGHEVDV SAGVAPATAL LTTSSTRQVV RVDLAVGDRD
LLTEDAGVTV QLPGGESVAG VVESVGTVAS VEEGEEGAGG GGDPTVEVVI DLEEDPAGFL
DQAPVTVVAR GESREDVLAA PVGALIALPG DRYGLSVVDA DGTVRDVPVE TGWFSDGRVE
VSGEGIGEGT EVVVPE