Gene Ndas_4702 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4702 
Symbol 
ID9248584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp5582045 
End bp5583238 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content72% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003682594 
Protein GI297563620 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.595604 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.45539 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCGAACG GAACCAACGC CCTCTCCATG ACCGCGGCCA TCGTCGCCAA GGACGTGCGC 
CAGCGGCTGC GGGACGGCAG CCTGCTGGTC TTCGGGCTGC TCCTGCCGCT CGGGGTGGCC 
TTCTTCTTCA ACATGCTGCT CGGCGACGGG ACGTCCCAGG GGACGAGCTC GGAGTACGTG 
GTCGTCGACG GCGACTCCGG ATCGCTCGGC GAGGGCTTCG TCGACGAGGC GCTGCGCCCC 
CTGGAGGACG ACGGGGTGCT GGAGCTGTCC GAGGCCGGTT CCGAGCGCGA GGCGCGCGAG 
GCGGTCGAGG CGGGGGCCGC CGACGCGGCC TTCCTCATCC CCGAGGACTT CACCGAGTCG 
CTGGAGGCGG GCGAGGACGC GGTCCTCACC GTCGTCGGCG ACGCCGACTC CCCCGTGGCC 
ACCCACATCG CCCGGGAGAT CGGCCGCGCC TACGCCACCG AGCACCACCG CATCCGACTC 
GCGATCGCCA CCGGCTTCGA CTCCGAACCC GACCCGGCCG CCGCGGCCCG GCTCCTGGAG 
GAGGCGGAGA CGGCGGCGCC GCCGCTGACG GTGGTCGAGG ACGCGGACCT GGAGTGGCGG 
GAGCTGGGCA CCGCCACCTA CTACTCGGCC TCCATGGCGT TCTTCTTCGT CTTCTTCGCG 
GCGATGTTCA GCGTCACCAG CATCTTCGAC GAGAAGGCGG GCGGGACCCT GGCGCGCCTC 
CTGGCCAGCC CGATCCCGCG GGGGGCGATC CTGGTCGCGA AGCTCTCCAG CGGACTGCTC 
ATCGGCCTGG CGAACATGGC GGTCCTGGCC GTCGCGACGA CCCTGTTCTT CGGCGCCGAC 
TGGGGCGACC CGCTGGGCGC GGCGGCGCTG ATCACCACGG GCGTGCTGGC CGTCATCGGG 
CTCACCGCCG CCGTGGCGAG CTTCGCGCGC AGCTCGGAAC AGGCCGCCAA CTGGCTCTCG 
GTCCTGGCGA TGCTGCTCGG AGCGTTCGGT GGAGCGCTGT TCCCGATCTC GCAGCTCAAC 
GCGCTGGCGG TCGTCAGCTA CCTGACCCCC CACCGGTGGT TCCTGCTCGG CCTGGGCGAG 
CTCTCGGCGG GAGGCGTCGG CTCGGTCCTC CTGCCGTGCG CGGTCCTGCT CGCGCACGGC 
CTCGCCGGCT CGACCGTCGC GCTGTTCCGT ATGGGACGGA TGGTGAACTC ATGA
 
Protein sequence
MANGTNALSM TAAIVAKDVR QRLRDGSLLV FGLLLPLGVA FFFNMLLGDG TSQGTSSEYV 
VVDGDSGSLG EGFVDEALRP LEDDGVLELS EAGSEREARE AVEAGAADAA FLIPEDFTES 
LEAGEDAVLT VVGDADSPVA THIAREIGRA YATEHHRIRL AIATGFDSEP DPAAAARLLE 
EAETAAPPLT VVEDADLEWR ELGTATYYSA SMAFFFVFFA AMFSVTSIFD EKAGGTLARL 
LASPIPRGAI LVAKLSSGLL IGLANMAVLA VATTLFFGAD WGDPLGAAAL ITTGVLAVIG 
LTAAVASFAR SSEQAANWLS VLAMLLGAFG GALFPISQLN ALAVVSYLTP HRWFLLGLGE 
LSAGGVGSVL LPCAVLLAHG LAGSTVALFR MGRMVNS