Gene Ndas_4641 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4641 
Symbol 
ID9248522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp5513728 
End bp5514723 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content77% 
IMG OID 
Producthelix-turn-helix protein 
Protein accessionYP_003682533 
Protein GI297563559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.640764 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCCTG CGGGTTCTGA GACGGTCGGG CTTGCAGAGG CGCTGGAACT CCGGGCGTCG 
CCGGAGCGGG CAGCCGAGGC GGTCCGCTCG GTCAGCGCGC GCGTCGTCGC CCTGGACACC 
CGGTACGGCG CCCGCGACAC CGTGGACGCC GCGGCGCGCG CCGCGGCCCG CGCCCGAGGG 
GCGGTCCGCA CGCGTCTGCC CGACTCGGCG GACGTGCTCG CCGCGACCGC CGAACTGCAC 
CAGGTCACCG GCTGGGTGGC CTTCGACGCC GAGCGCCAGC GCCTGTCCCG GCGGATGACC 
CTGACGGCGC TGGACGCCGC GCGCGGGGCG GGCGACCTCT CCATGGAGTA CTTCGCGCTC 
AGCCAGCTGG CGATGCAGGA CGTCCACCTG TGGCGGCCGA CCGAGGCCCG GCGGGTGTGC 
GAGGCGGCGC TGGCGGCGGG AACGGCGGGG AGCGTGCGCA CCCTGTTCAC CCTGCGGCTG 
GCGCGTGCCG TGGCCCAGGA GGGCGAGCGA ACCCGGGCAC GGAAGCTGCT CGGGGAGACC 
CTCAGCCGTT ACCTGGAGGG GCCGCGCCGG GGCGATCCGG CATGGACGTG GTGGCTGACC 
GAGGCGGAGG TCACCTGGCA CCTGGCCATG GTCAGCGCCG ACGCCGGTGA GCCGGGCACG 
GCCGCCGAGT CCTTCGCCCG GACGGTGGAA CTGGTCCGGG CGGACGGACG GTCCGCGGGA 
GCGGAGGAGG CGGACGGGGG CGGCCGGTTC GTGTTCCACG CCGCGGTGAG CCTGCTGTGG 
GCGCTGGCCC GCGCCCGGTC GTGGGAGGAG GCGGAGGCCG TGCTGGTGCG CGACGTGCTG 
CCCCGCCTGG GAGAGGTGTC GTCGGTGCGC TGTGAGCGGC TGCTCGCCGA GGTGGTCCGG 
CGGCTCGACA CGGCGCGGGG CCGCCCCTCC CTGCGGGACA CCGCGCGGTG GTGCGCGGAA 
CGGTCAGGCG TGGGAGTTCC GGAGGCCCCG GTGTAG
 
Protein sequence
MAPAGSETVG LAEALELRAS PERAAEAVRS VSARVVALDT RYGARDTVDA AARAAARARG 
AVRTRLPDSA DVLAATAELH QVTGWVAFDA ERQRLSRRMT LTALDAARGA GDLSMEYFAL 
SQLAMQDVHL WRPTEARRVC EAALAAGTAG SVRTLFTLRL ARAVAQEGER TRARKLLGET 
LSRYLEGPRR GDPAWTWWLT EAEVTWHLAM VSADAGEPGT AAESFARTVE LVRADGRSAG 
AEEADGGGRF VFHAAVSLLW ALARARSWEE AEAVLVRDVL PRLGEVSSVR CERLLAEVVR 
RLDTARGRPS LRDTARWCAE RSGVGVPEAP V