Gene Ndas_4582 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4582 
Symbol 
ID9248463 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5430174 
End bp5431421 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content76% 
IMG OID 
Productzinc finger SWIM domain protein 
Protein accessionYP_003682475 
Protein GI297563501 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCAAGG AGTCGTCCTG GCCCGAGCGC GGAGCGGTCG CCGCCCCCTC CGGCGGCACC 
TCCGCCGTCT GGGGCGAGTG CAAGGGCAGC GGTTCCAAGC CCTACCTGGC CGCCGTCCAC
CTGGACGGCG CGGGCGGGAC CGCCTACAAG TGCAGCTGCC CCAGCCGCAA GATTCCCTGC
AAGCACGTCC TGGGCCTGCT GGCCCTGTGG ACCCAGGACA GCGTGGCCGA CCGGGAGGAG
CGGCCCGAGT GGGTGGCCAA GTGGCTCTCC GGAAGGGCCG CCCGCCAGGA GAAGGCCAAC
AGCCCGGCGG CCCCCGCCGA CCCCGAACGG GCGGCCGCGA CCCTGCGCAG GAGGGAGGAG
GCGGTCCGGG CCGGGGTCGA CGAACTCGGC CTCTGGCTGC GCGACCAGGT CGACACCGGG
CTGGCCGAGG TGCCCAAGCA CGGCTACGAC CACTGGGACC GCATGGCCAA GCGGCTCGTG
GACGCCAAGG CGGGCGGCGC GGCCTCCCTC GTCTCCCAGC TGCCCTCCGC GGCGCGCGGG
GACAGCTGGC CCGAGCGGAT GCTCGAACGG CTCGGCCTCC TCCACCTGCT GGTCAACGGC
TACCGCGCGG GCGACGCCCT CGACGAGCGC GTCCGCGGCG CCGTCCGCTC CCGGGTGGGC
ATCACCGTCA AGGCCGAGGA CGTCCTCGCC GGCGGTGAGC GCGTCCGCGA CACCTGGCGG
GTCCTGGGCT GGCACGACGC CCCCGCCCTC GAAGCCGACA TGCGCGTGCG CCGCCTGTGG
CTGCGCGGCA CCGCGACCGG GCGCGTGGCC CTGTACCTGG CCTTCGCCCG ATCCGGCCAG
GCGCCCACCA CCCCCTTCCG GGCCGGCACC GACGTGGAGG CCGAGTTCGC CTTCTACCCC
GACGGCCACC GGGTCGCCCC CGTCGGCGAC GGCACCACGA CCGAGGCGGC CCCGCCCGAG
GGCGGCACGG TCACGCAGGC CCTCGACGCC TTCGCCGCCT CCCTCGCCGA GGACCCCTGG
CGCGACACCT GGCCGGTCGT GCTCGACCGC GCCGCCCCCG CCCACGACGG CCGGTGGTAC
CTCACCGACA CCGAGGGCCA CGCGCTACCC CTGGCCTCCC CCGAGCCCTG GCGCCTCCTC
GCGGTCACCG GCGGCCACCC CTCCACCGTC GCCGCCGAGT GGTCGCCCGC GACGGGACTC
ACCCCCATCA CCGTGTGGGA CCGGAACGGA AAGGCGGTCT CCCTGTGA
 
Protein sequence
MAKESSWPER GAVAAPSGGT SAVWGECKGS GSKPYLAAVH LDGAGGTAYK CSCPSRKIPC 
KHVLGLLALW TQDSVADREE RPEWVAKWLS GRAARQEKAN SPAAPADPER AAATLRRREE
AVRAGVDELG LWLRDQVDTG LAEVPKHGYD HWDRMAKRLV DAKAGGAASL VSQLPSAARG
DSWPERMLER LGLLHLLVNG YRAGDALDER VRGAVRSRVG ITVKAEDVLA GGERVRDTWR
VLGWHDAPAL EADMRVRRLW LRGTATGRVA LYLAFARSGQ APTTPFRAGT DVEAEFAFYP
DGHRVAPVGD GTTTEAAPPE GGTVTQALDA FAASLAEDPW RDTWPVVLDR AAPAHDGRWY
LTDTEGHALP LASPEPWRLL AVTGGHPSTV AAEWSPATGL TPITVWDRNG KAVSL