Gene Ndas_4562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4562 
Symbol 
ID9248443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5407050 
End bp5407832 
Gene Length783 bp 
Protein Length260 aa 
Translation table11 
GC content77% 
IMG OID 
Productalpha/beta hydrolase fold protein 
Protein accessionYP_003682455 
Protein GI297563481 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAGGCCC TCAGGGGCAC GGACGGGGTC GGACGCGCGT CGATGGCCTG GTGGCACGTA 
CCCGGACAGG GGCCGCCGGT GGTCTGCGTG CACGGCGCGG GGATCTCCTC ACGCCAGACG
CTGCCCGTGG TCAGGGCACT GGAGGGAAGG ACGCCCGCCT GGGCCGTCGA CCTGCCGGGG
TTCGGCGCGA GCACCGCACC CGACCACGCG CCCACGGTCA CCGGACTCGC GGACTCCCTC
CTCGCGTGGC TCCGCGTCCG CGGGATCGAG CGGCCCTGCC TGCTCGGGCT CTCCCTCGGA
ACGCAGGTGG TCGCCGAGGC CGCGGTGCGC GCGCCCGACG AGGTGGGGTC GCTCGTGCTG
GCCGGGCCCA CGACGGACCC CGGGGCGCGC TCGCTGCCCG AACTGGCCGC GCGCCTGCTG
CGCGACGCCA CGCGCGAGGA CCTCTCGGTG ATCCGCTCCG TCGTCGCCGA CTACTGGGAC
GCTGGGGTGC GCAGGGACGT CCGCAGTCTT CTGGCCAGCC GCGAGCACCG GATCGAGACG
GTCCTGCCGA GGGTGGGGCA GCCGACCCTG GTCCTGCGCG GGGGCAGGGA CCCCCTCTGC
CCCGCTCCCT GGGCGCGGGA GGCCGCCCGG CTGCTGCCCC GGGGGCGGCT CGTGACCCTG
CCCGGACAGC CCCACGCGCT CACCGCCGCC GCCCCCGGCC GGGTCGCCGA CCTGGTCGGG
GAGTTCGTTC GGGAGACGGC ACGGGACCGG AGGGCGGGGG CCGAGTGGTC GCCGAACGTG
TGA
 
Protein sequence
MEALRGTDGV GRASMAWWHV PGQGPPVVCV HGAGISSRQT LPVVRALEGR TPAWAVDLPG 
FGASTAPDHA PTVTGLADSL LAWLRVRGIE RPCLLGLSLG TQVVAEAAVR APDEVGSLVL
AGPTTDPGAR SLPELAARLL RDATREDLSV IRSVVADYWD AGVRRDVRSL LASREHRIET
VLPRVGQPTL VLRGGRDPLC PAPWAREAAR LLPRGRLVTL PGQPHALTAA APGRVADLVG
EFVRETARDR RAGAEWSPNV