Gene Ndas_4537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4537 
Symbol 
ID9248417 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp5381128 
End bp5381763 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content66% 
IMG OID 
ProductRhomboid family protein 
Protein accessionYP_003682430 
Protein GI297563456 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTCTA CTCTCGATGG GGTGAAGCAG TCCAGAATCA CCGCCATCCT GACCGTAGCG 
GGGATGCTCG CGGCCATGTG GGTCTTCGAG ATCCTCGACA GCTTCGTGCT CCTCGGAAGG 
CTCGACCAGC AGTACGGTCT GCGCGCCTGG GACCTCCAGG GGCCCTGGAC CGTGTTCACC 
GCGCCGTTCA TGCACGGGAA CCTGGAACAC CTCATCGGCA ACTCGCTGCC GTTCCTCGTG 
CTGGGCTCGC TCGTCGCGTT CAGCGGCCTG GGGCGGTTCC TGCTCACCAC GCTGATCATC 
ATCCTGGTCA GCGGTGTGGG CGTGTGGCTG TTCAGCTCAC CGTTCTCCCT CACCGTGGGC 
GCCAGCGGCC TGGTCTTCGG TTACTTCGGC TACACGGTCC TGCGCGGGAT CGTCGAGCGC 
AAGACCATCG ACATCGTCAT CATGATCTGC GTGGTCCTCT TCTACGGGAC GATGATCTGG 
GGAGTCCTGC CCCAGTACCC CGGCGTCTCG TGGCAGGCGC ACCTCTTCGG GTTCGTCGGC 
GGCATGCTCG CGGCCTACCT GCTGCCCAGA CGGGAGCGCC GCAGGCAGCT CGACCAGGGC 
TACGGAGGCG CCCAGGGCGG CTACTACGCG CCCTGA
 
Protein sequence
MSSTLDGVKQ SRITAILTVA GMLAAMWVFE ILDSFVLLGR LDQQYGLRAW DLQGPWTVFT 
APFMHGNLEH LIGNSLPFLV LGSLVAFSGL GRFLLTTLII ILVSGVGVWL FSSPFSLTVG 
ASGLVFGYFG YTVLRGIVER KTIDIVIMIC VVLFYGTMIW GVLPQYPGVS WQAHLFGFVG 
GMLAAYLLPR RERRRQLDQG YGGAQGGYYA P