Gene Ndas_4473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4473 
Symbol 
ID9248352 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp5311404 
End bp5311829 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content70% 
IMG OID 
ProductEndoribonuclease L-PSP 
Protein accessionYP_003682368 
Protein GI297563394 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.871533 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCACCG TCACCTTCGG CATCGCTCCG GGCTACGGCG AGAAGCTGCA CGCGGCCCTC 
GGCTACAGCG GGGCCGTCCG CGTCGGCGAC CGGGTCGAGA TCTCAGGCCA GGCCGGAGTG 
GACGACGACC TGGCCGTCCC CGACTCGCTG GAGGACGAGA TCGTCCAGGC CTTCGACAAC 
GTGGAGAGCA CGCTCGCCAC GGTCGGCGCG ACCTGGAAGG ACGTCATCCA CGTCAACTCG 
TACCACAAGG TCGCGCCGGG GGACGACGTC ATCGGCGACG ACCACAACAG GGTCATGGCC 
GAGCAGTTCC GCCGCCGCCT CGGCGGCCGT GCGCCGATCT GGACCGAGAC CGGCGTCACC 
GTCCTCGGCC TCGCCGCGAT GCGCGTGGAG ATCCGCGTCA CCGCCATCGT CGGCTCCGGG 
AGCTGA
 
Protein sequence
MSTVTFGIAP GYGEKLHAAL GYSGAVRVGD RVEISGQAGV DDDLAVPDSL EDEIVQAFDN 
VESTLATVGA TWKDVIHVNS YHKVAPGDDV IGDDHNRVMA EQFRRRLGGR APIWTETGVT 
VLGLAAMRVE IRVTAIVGSG S