Gene Ndas_4438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4438 
Symbol 
ID9248314 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5281911 
End bp5282651 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content68% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003682333 
Protein GI297563359 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCCCTC AGGTCCAACG CACCGACCCG CCCTACATGC AGGTCGTCAA GCACATCAAG 
GCCGAGATCG AGTCCGGTGT CCTCCCTGAT GGGAAAAAGA TCGACTCGGT GCGCACCATC
GCCGCGAAGT GGAAGATCTC GCTGGCGACC GCGACCAAGG TCGTCGGGAC GCTCAAGGCG
GAGGGCCTGG TGCGCAGCGA ACCCGGCCGG GGCAGCATCG TCACCCGCGA CCAGGCGGCG
GACAGCGCCA AGGACCGTGT GGTCCGCAGC CTGGAAGGCC GGATCTACGC GGCGAACGAG
CGTGCGGAGA TCCGCGCGGC CGAACTGGTG TCGGCACCCG AGGACGTCGC GGACGCCCTC
GGTGTGCCCG CGGGCACGAA CGTCATCCGA CGCCAGCGGG TCACCCTCCG GGATGACGTG
CCCTCCTCGG CCAGCACGTC CTGGTTCAAC GGAGAGCTGG CCGAAAGCGC TCCGCTGCTC
CTGGAGGCGA AGCGGTTGCC CCAGGGCACC CCGAAGTACG TCCAGGAGAA GACAGGGCTC
ACACCCGCCA CCGGCAAGGA CCAGCTCCGC GCCGACATCG CCTCGGAAGA GGACTCCGCA
GCGCTGGGTA TCCCGCTGGG TTCCCCCGTG CTGCGCAAGC AGAACTGGGT GTTCAACGCC
GACGGCGACG TGATCGAGTT CGGCCAGTCC GTCTCCGTGG CCCGCCGCTG GGCCACCTAC
AACTACGAGA TCTCCAGGTA G
 
Protein sequence
MSPQVQRTDP PYMQVVKHIK AEIESGVLPD GKKIDSVRTI AAKWKISLAT ATKVVGTLKA 
EGLVRSEPGR GSIVTRDQAA DSAKDRVVRS LEGRIYAANE RAEIRAAELV SAPEDVADAL
GVPAGTNVIR RQRVTLRDDV PSSASTSWFN GELAESAPLL LEAKRLPQGT PKYVQEKTGL
TPATGKDQLR ADIASEEDSA ALGIPLGSPV LRKQNWVFNA DGDVIEFGQS VSVARRWATY
NYEISR