Gene Ndas_4405 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4405 
Symbol 
ID9248280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp5239869 
End bp5242214 
Gene Length2346 bp 
Protein Length781 aa 
Translation table11 
GC content74% 
IMG OID 
Productserine/threonine protein kinase 
Protein accessionYP_003682300 
Protein GI297563326 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.42637 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGAAGT GCACGGTCCC CGGCTGCCCC GGCCGGGTCG AGGACGGTTT CTGCGGCGTG 
TGCGGCATGG CCCCCGCGGA CGTACGGCCT CCGGACGGCC CCGCCCCCCG GCAGCGGCCC
GTGCCGCCGA CCTCCGGCCC GCAGCCCTCC CTCGGCGCGA ACTCCTCCGC CAACCCCCTC
AGCGGCGACC CCGTCCACTC CCACCCCCTC TCCGGCAACG TCAGGCTCTC GGGGCGCTCC
GGTCCCGGCA GTGTCTCCGC GACCTCGGGC GCCAGCGTCA GCGGCGCCGG ACGCGGCAGC
CGCCGATCCT CCCGCGGCAT GCTCGGCATG GGCATGGTCC AGGTGCCCCT CGTCCCCTAC
CGGGACCCCT CCGAAGCCGT CATGGACAAC CCCGTCGTCG CGGAGAAGAA CCGCTTCTGC
GGCAACTGCG GGGAGCGGGT CGGCCGCACC CAGGGCGACC AGCCCGGGCG CACCGAGGGC
TTCTGCCGCA AGTGCGGGAC CCAGTTCTCC TTCACGCCCA AGCTCTCCCC CGGGGACCTG
GTCGGCGGCC AGTACGAGGT GCTCGGCTGT CTGGCCCACG GCGGCCTCGG CTGGATCTAC
CTGGCCCGGG ACCGCAACGT CAACGACCGC TGGGTGGTCC TCAAGGGCCT GCTCAACGCC
GGTGACGCCG AGGCGCACAA GGCGGCCGCC GCCGAGCGCG CGTTCCTCTC CGAGGTCGAG
CACCCCAACA TCGTCAAGAT CATCAACTTC TCCCAGCACC CCGACCCGCG CACCGGCATC
CCCGGCGGCC ACATCGTCAT GGAGTACGTG GGCGGCAAGT CCCTGCGCGA GCTGCTCATC
GAGCGCCGGG AGGACGACCC CGACGCCGTC CTGCCCCCGG ACCAGGTCAT CGCCTACGGC
CTGGAGGTCC TGCGGGCGCT GGGCTACCTG CACTCCAGGG GCCTGCTCTA CTGCGACTTC
AAACCCGACA ACGTCATCCA GAGCGAGGAG CAGATCAAGC TGATCGACCT GGGCGGCGTG
CGGCGCATGG ACGACACCGT CAGCCCCGTC TACACCACGC CCGGGTACCG GGTGCCCGAG
GAGGAGCTGC GCGGCCCCGG CCCCACGGTC AGCGCCGACC TGTACTCGGT CGGCCGCGCC
CTGGCCGTGC TCAGCTTCCG CTTCAGCTTC ATGCGCGACC ACCCGCACAG CATCCCGCCG
AGGGAGACCG TGCCGCTGCT CCAGCGCCAC CCGTCCTTCG ACCGGCTGCT GCGCCGCGCC
ACGCACAGCG AACCCGAACT GCGCTTCCAC GACGCCGAGG ACATGGCCGA CCAGCTCACC
GGCGTCCTGC GCGAGGTGCT CTCCGACCTG GAGGGAACGC CGCACCCGGC CCCCTCGACC
CTGTTCGGCG CGGAGAACCC CGCCGCCCGA CCCGACCCCG GCGCCCACAA CGCCGACCGC
ATGCTCCTCG CGCCCCCGCC CACCGACGCG GCGGCGCTGC TGCCCGCGCC CCTCATCGAC
CAGTCCGACC CGGCCGCCCA GCACCTGCGC GGTTTCCAGA CCCTGCCGCC CGAGGAACTC
GTCCCCGCGC TGCGCGCCAT GCCCTCGCCC ACCCCCGAGA CCCTGCTGAT GCTGGTCCGC
GCGCTCGTCA CCGTCGGACG CCAGGGCGAG GCCATGGACG TCCTCCAGCG GTTCAGCGAA
GTGGTCCCGG GCGACTGGCG CACCATGTGG TACCTGGCCG TCGCCGAGCT GAGCACCGGC
CGGTTCCGCG ACGCCCGCGA CCACTTCGAC GAGCTGTACG ACCACCTGCC CGGGGAACTC
GCGCCCAAGC TCGCACTGGC CCTGGCCTGC GAACGGACCG GCGAGCACGA GACCGCCGCC
CGCCTGTTCC GGGCGGTCTG GAACACCGAC CGCTCCTTCG TCAGCGCCGC GTTCGGCCTG
GCCCGCATCC GCCTGGTCCA GGGGGACCGT GCCGCTGCCA CCGCCGTCCT GGACACGGTC
CCGGAGCTGT CGCGGCTGCA CGTCCACGCC CAGACCGCGC TGATCGCCGT GCTCGCGGCG
CACCACCAGG GCACCGGGGC CGCCGACTTC GTGCAGGCCG GACGGCGCCT GGAGCGGATC
GGCCTGGACG GCGAGTCCGC CGACCGCCTG GCGGTACGGG TCCTGGAGTC GGCCCTGGGC
TGGTTCGGCG CGGGTGCGGG GGCGTCGGCG GGGGAGGAGC TCCTCGGCGC CCCGTTCACC
GAGAACGGTG TGCGGGCCAA CCTGGAGCGC CGCTACCGCG CGCTTGCCCA GCGCGCCGTC
GCGCCGTCGG AACGCTATGA GCTCGTCGAC AGGGCCAACT CCCTACGCCC CGTGACGCTG
CTGTGA
 
Protein sequence
MTKCTVPGCP GRVEDGFCGV CGMAPADVRP PDGPAPRQRP VPPTSGPQPS LGANSSANPL 
SGDPVHSHPL SGNVRLSGRS GPGSVSATSG ASVSGAGRGS RRSSRGMLGM GMVQVPLVPY
RDPSEAVMDN PVVAEKNRFC GNCGERVGRT QGDQPGRTEG FCRKCGTQFS FTPKLSPGDL
VGGQYEVLGC LAHGGLGWIY LARDRNVNDR WVVLKGLLNA GDAEAHKAAA AERAFLSEVE
HPNIVKIINF SQHPDPRTGI PGGHIVMEYV GGKSLRELLI ERREDDPDAV LPPDQVIAYG
LEVLRALGYL HSRGLLYCDF KPDNVIQSEE QIKLIDLGGV RRMDDTVSPV YTTPGYRVPE
EELRGPGPTV SADLYSVGRA LAVLSFRFSF MRDHPHSIPP RETVPLLQRH PSFDRLLRRA
THSEPELRFH DAEDMADQLT GVLREVLSDL EGTPHPAPST LFGAENPAAR PDPGAHNADR
MLLAPPPTDA AALLPAPLID QSDPAAQHLR GFQTLPPEEL VPALRAMPSP TPETLLMLVR
ALVTVGRQGE AMDVLQRFSE VVPGDWRTMW YLAVAELSTG RFRDARDHFD ELYDHLPGEL
APKLALALAC ERTGEHETAA RLFRAVWNTD RSFVSAAFGL ARIRLVQGDR AAATAVLDTV
PELSRLHVHA QTALIAVLAA HHQGTGAADF VQAGRRLERI GLDGESADRL AVRVLESALG
WFGAGAGASA GEELLGAPFT ENGVRANLER RYRALAQRAV APSERYELVD RANSLRPVTL
L