| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4280 |
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| Symbol | |
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| ID | 9248154 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 5095450 |
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| End bp | 5097612 |
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| Gene Length | 2163 bp |
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| Protein Length | 720 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | |
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| Product | choline/carnitine/betaine transporter |
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| Protein accession | YP_003682175 |
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| Protein GI | 297563201 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.692689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCCACCG ACGGAGGGCA GCACCGTCCG GACCGCGAAC CGGAGCCGGA AGCCGAGCCG
GAGCCGGAAA CCGGACCGGA GACCCCCGAG GAGGCGGAGC GCGGTCCGAG CCGCCTCAAA
CCGGTCGTGT TCTACGGCTC GTCCGCGCTG ATCGTCGCGC TCTCGGTCTG GGCGATCGTC
GCGCCCACGC ACGCCGGGAA CACCATCGGC GCCGTCGTGA CGTGGATCAC CGAGGTGTTC
GGCTGGTACT ACTTCCTCGC CACCACCCTC TACCTCGGGT TCGTGGTGGT CATCGCGCTC
TCCCGCTACG GCAGGGTCAA GCTCGGCCCC CAGCACTCCA AGCCCGACTA CGGGGTGTTC
GCCTGGGCGG CCATGCTGTT CGCGGCGGGC ATCGGCATCG ACCTGCTGTT CTTCTCCGTC
TCCGGGCCGG TCAGCCACTA CCTGGCGCCG CCCGAGGGCG ACGCGCAGAC CGTCGAGGCG
GCGCGGCAGG CCGTGGTGTG GACGCTCTTC CACTACGGCG TGACCGGGTG GGCGATGTAC
GCGCTGATGG GCATGGCCCT GGGCTACTTC TCCTTCCGCT ACCACCTGCC CCTGGCCATC
CGGTCGGCCC TGTACCCGCT GATCGGCAGG CGCATCCACG GCCCGGTCGG CGACGCGGTC
GACCTGGCGG CCGTCATCGG CACGATCTTC GGCATCTCCG TGTCGCTCGG CATCGGCGTC
GTGCAGCTCA ACTACGGGCT CAACTTCCTC TTCGGCGTCC CCGAGGGCGT CGCGGCCCAG
CTCGGCCTGA TCATCGTCGC CGTGCTCGTG GCCACGATGT CGGCGGTGGC GGGCGTGGAC
CGGGGTATCC GGCGGCTGTC CGAGATCAAC GTCGTGCTAG CCGTCGTCCT GATGCTCTAC
GTGCTGGTCT TCGAGGACCC CCTCTACCTG CTCAACGCCC TCGTCCTCAA CATCGGCGAC
TACCTCAGCC GCTTCCCCTC CATGACGCTG AACACCTTCG CCTACGACCC GCCGACCGAC
TGGCTCAACG CCTGGACGCT GTTCTTCTGG GCCTGGTGGA TCGCCTGGGC GCCGTTCGTG
GGGATGTTCC TCGCCCGGAT CTCGCGCGGC CGCACCATCC GGCAGTTCGT GGCGGCGACG
CTGGTGGTCC CGCTCCTGTT CACGCTGACC TTCCTGTCCT TCTTCGGCAA CAGCGCGCTG
AGCGTCGTGC GCGAGGGCGG CGCCGCGTTC GGCCAGACCA CCATGAACCA CCCCGAACAG
GGCTTCTACG CGCTGCTCGC GCAGTACCCG GGGGTGCTGT TCAGCGCCGG GCTGGCCACG
GTCGTCGGAC TGCTCTTCTA CGTCACCTCC GCCGACTCCG GCGCGCTGGT GATGGGCAAC
CTCAGCTCCC ACCTGCCGAC GCCGCTCACC GACGCCTCCC CGTGGCTGCG CGTCTTCTGG
TCGGCGGCGA CCGGCCTGCT CACCCTCGCC ATGCTCCTGG TCGGCGGGGT GGACACGCTG
ACCAGCGCGA CCATCATCAT GGGCCTGCCG TTCTCGTTCG TGATGTTCGT GATCATGTGG
GGCCTGTTCA AGGCGCTGCG GATCGAGAAG TTCCGCAAGG ACGCCTTCCG GACCACCCTG
TCCTCGTCGC TGTCGGACCG GACCGCGGCC GACCGGCGGG GGCCCGAACG CAACTGGCGG
CAGCGGATCA AGCGGGCGGT GAGCTTCCCC GGCAGGCGGG CGGCCGAGCG GTTCGTCCGC
GACGTGTGCC GCCCGGCGTT CCGGGACGTC GCCGAGGAGC TGCGCGAACA CGGCGCGGAG
GCGTCGGTGA GCGAGGGGGT GGACGAGGCC GTCGGCATCG CCTACCTGGA GCTGCGGGCG
CCGATGGGCG AGGAGGAGGA GTTCAGCTAC CGGGTGTGGC CGATGGAGGT GCCCACCCCC
GCGTTCGCCA TGCGCTCGCT CGCCGAGCAC GACACCTACG TGCGCTTCGA GGTCTACCTC
ACCGAGGGCA GCCAGGGCTA CGACGTGATG GGCTACACCA AGGAGCAGCT CATCGGCAAC
ATCCTCGACG AGTACGAGCG GCACCTGGAG TTCCTGCGGC TGCACCGGGA GGCGACCTCG
GGCTCCGCGC TTCCCGACCA CGGGCCGGGC ACCGCCGACG TCCAGGACAC CGAGGAGCGC
TGA
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| Protein sequence | MATDGGQHRP DREPEPEAEP EPETGPETPE EAERGPSRLK PVVFYGSSAL IVALSVWAIV
APTHAGNTIG AVVTWITEVF GWYYFLATTL YLGFVVVIAL SRYGRVKLGP QHSKPDYGVF
AWAAMLFAAG IGIDLLFFSV SGPVSHYLAP PEGDAQTVEA ARQAVVWTLF HYGVTGWAMY
ALMGMALGYF SFRYHLPLAI RSALYPLIGR RIHGPVGDAV DLAAVIGTIF GISVSLGIGV
VQLNYGLNFL FGVPEGVAAQ LGLIIVAVLV ATMSAVAGVD RGIRRLSEIN VVLAVVLMLY
VLVFEDPLYL LNALVLNIGD YLSRFPSMTL NTFAYDPPTD WLNAWTLFFW AWWIAWAPFV
GMFLARISRG RTIRQFVAAT LVVPLLFTLT FLSFFGNSAL SVVREGGAAF GQTTMNHPEQ
GFYALLAQYP GVLFSAGLAT VVGLLFYVTS ADSGALVMGN LSSHLPTPLT DASPWLRVFW
SAATGLLTLA MLLVGGVDTL TSATIIMGLP FSFVMFVIMW GLFKALRIEK FRKDAFRTTL
SSSLSDRTAA DRRGPERNWR QRIKRAVSFP GRRAAERFVR DVCRPAFRDV AEELREHGAE
ASVSEGVDEA VGIAYLELRA PMGEEEEFSY RVWPMEVPTP AFAMRSLAEH DTYVRFEVYL
TEGSQGYDVM GYTKEQLIGN ILDEYERHLE FLRLHREATS GSALPDHGPG TADVQDTEER
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