| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_4216 |
|---|
| Symbol | |
|---|
| ID | 9248090 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 5034807 |
|---|
| End bp | 5035454 |
|---|
| Gene Length | 648 bp |
|---|
| Protein Length | 215 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, TetR family |
|---|
| Protein accession | YP_003682114 |
|---|
| Protein GI | 297563140 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCACGA CGAGCGCCGA ACCGGAGGAG CAGCTCGGGC TGCGCGAGCG CAAGAAGGCC
CGGATGCGCG AGTCCCTCAT GGAGTCGGCG CTGCGCCTGT TCCACGAGAA CGGTTACCAG
CGGACGACGA CAGAGGAGAT CGCCTCCTGC GTCGGGGTCT CCCAGCGCAC GTTCTTCCGC
TACTTCGGCT CCAAGGAGGA CGTGGTCCTG GAGGCGGTCG AGGACCTCGA CGAGCAGCTG
TTCGCGGCCC TGCTGGCCCG CCCCGCCGAG GAGCCGCCGT TCACCGCGCT GCGCAACGCG
ATGCTCGACC ACTGGGCCTA CCTCGAACGC GAGATGCTCC ACCTCCGGGG CAGCGCCATG
GGACTGGTGT CCGAGAGCCC CGAGCTGATC GAGGTCAACA TGCGCTACTG CCACCGCAGG
CAGGAGCGGC TGGCCCGGGC GCTGGGCGAG CGCACCGGCG CGGACCCGGT CACCGACCCC
CGCCCGGGGG TCCTGGCCTC GGTGTTCCTG TCCGTGCTCA ACAGCGGCCA CCAGGCGTGG
TGCGCGTCCG GCTCCAGCGA CGTGGAGAAG CTGGTCCAGG CGTTCCTCGA CCGGTTCGAC
CTGGTGCCCG AGGTGGTCGG CGGCCGTTGG GAGGGCCCGC GCGGCTGA
|
|---|
| Protein sequence | MSTTSAEPEE QLGLRERKKA RMRESLMESA LRLFHENGYQ RTTTEEIASC VGVSQRTFFR
YFGSKEDVVL EAVEDLDEQL FAALLARPAE EPPFTALRNA MLDHWAYLER EMLHLRGSAM
GLVSESPELI EVNMRYCHRR QERLARALGE RTGADPVTDP RPGVLASVFL SVLNSGHQAW
CASGSSDVEK LVQAFLDRFD LVPEVVGGRW EGPRG
|
|---|
| |