Gene Ndas_4200 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4200 
Symbol 
ID9248074 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp5017376 
End bp5018203 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content74% 
IMG OID 
ProductABC-2 type transporter 
Protein accessionYP_003682098 
Protein GI297563124 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.724357 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCC ACGAGGTGAC CGGGACCCCG GCGGGGGCGG CCGGGGCGGA GACGGCCGGG 
GCGCCCGCGG CGCGGGGGCC GGGCCTGGTG CGCGACACCG TGACCGTCTT CGCCCGCCAG 
ATGCGGCCGT TCCTGCACCG GCCGCCGATG CTGTTCTTCG GCATGCTGCA ACCGGTGCTG 
TACCTGGTGC TGTTCGCGCC CCTGCTGACG GGGCTGGCCG GCGCCGAGGG GCAGGACCCG 
TGGCAGTGGT TCGTCCCCGG CCTGCTGGTG ATGCTCGGCC TGTTCACGGC CGGGTTCGCC 
GGGTTCGGGC TGCTGCCGGA GATGTCCTCC GGAGCGCACG AGCGGCTGCT GGCCACCCCG 
GTGAGCCGGG TGTCGCTGCT GCTGGGGCGG GTCCTGCGCG ACGTGGTGAT GATGCTGGCG 
CAGATGGTGC TCATCCTCGT GCTGGTGGTG CCGCTCGGGT TCGAGGCGTC GCTGGCGGGA 
GCCGTCGTGG GGCTGCTCCT GCTCGCCGTC CTGGGCGCCG GGCTGGCCAC GCTGTCCTAC 
CTGGCGGCCC TGGCGGTCAA GCAGACCTAC GTGTTCGCGC CCATCGTGCA GACGCTGATC 
ATGCCGCTGA TGCTGCTGTC CGGCGTGCTG CTGCCGATGG AGCTGGCGCC GCCGTGGCTG 
TACGCGCTCT CGCGGGCCAA CCCGGTGGCC TACGTGGTGG ACGCCGAGCG CGCCCTGTTC 
GCCGGGCAGT GGGACGCCTC GGTCGCCCTC GGCTGGGCCG TGGCGGTGGT GCTGGCGGTC 
GCCGCGCTGG CCGGGGGGTC GCGGGCGATG CGCCGCCTCA GCTCCTGA
 
Protein sequence
MSFHEVTGTP AGAAGAETAG APAARGPGLV RDTVTVFARQ MRPFLHRPPM LFFGMLQPVL 
YLVLFAPLLT GLAGAEGQDP WQWFVPGLLV MLGLFTAGFA GFGLLPEMSS GAHERLLATP 
VSRVSLLLGR VLRDVVMMLA QMVLILVLVV PLGFEASLAG AVVGLLLLAV LGAGLATLSY 
LAALAVKQTY VFAPIVQTLI MPLMLLSGVL LPMELAPPWL YALSRANPVA YVVDAERALF 
AGQWDASVAL GWAVAVVLAV AALAGGSRAM RRLSS