Gene Ndas_4090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_4090 
Symbol 
ID9247963 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4887895 
End bp4888551 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content80% 
IMG OID 
ProductSAF domain protein 
Protein accessionYP_003681992 
Protein GI297563018 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.702052 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCAACG CCGCACCCCC GCCCTACCGG CACCGGCGCG CGCTCACCCG GCTCCTGGAC 
CGGCACCGGC GCGTCGTCGC CGCCCTCCTG GCCGCCGCCG CGCTCCTCAG CGCCGTCCTG 
GCCGTACGCC CCGCACCCGT ACCCGTCACC CGCGTCCTGG TCGCCTCCCG CGACCTCGGC 
GCCGCGGACC CCCTCACCGA GGGCGACCTC ACCGCCCGGG ACCTGCCCGC CGGGTCCGTG 
CCGGGCGGCG CGCTCGCGGC CGACACCGCG GCCGCCGGGC TCCGTCTCAA CGCTCCGGTA 
CGCCGGGGAG AGGTGATCAC CGACGCCCGG CTCGCCGACC CTCCCGCGCG GGCCTACGGC 
CCCGGCCTGG TCGCCGTTCC GGTGCGGGTG GCCGACCCCG GCGCGGTGGG CCTGCTCTCC 
CCCGGCAGCC GGGTGGACGT CCTCGCCGCC GGAGGCAGCG ACGACCTCGC GCCCGCCCGG 
GCGGGCCCCG CCGTGGAGGT GGTCAGCGAC CGCCCCGTCC TGGCCCTGCC GGAGGAGGAG 
TCCTCGGGCG GCGGGGAGGG CGGCGCGCTG ATCGTCGTCG CGGCCACGCC CGTCGAGGCC 
AGGAGTCTGG CGGGCCACGC GGCCGCCTCC CGGCTGTCCA TCACCATCCG CGGTTGA
 
Protein sequence
MTNAAPPPYR HRRALTRLLD RHRRVVAALL AAAALLSAVL AVRPAPVPVT RVLVASRDLG 
AADPLTEGDL TARDLPAGSV PGGALAADTA AAGLRLNAPV RRGEVITDAR LADPPARAYG 
PGLVAVPVRV ADPGAVGLLS PGSRVDVLAA GGSDDLAPAR AGPAVEVVSD RPVLALPEEE 
SSGGGEGGAL IVVAATPVEA RSLAGHAAAS RLSITIRG