| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3967 |
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| Symbol | |
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| ID | 9247838 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | + |
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| Start bp | 4743404 |
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| End bp | 4745962 |
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| Gene Length | 2559 bp |
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| Protein Length | 852 aa |
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| Translation table | 11 |
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| GC content | 79% |
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| IMG OID | |
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| Product | lipopolysaccharide biosynthesis protein |
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| Protein accession | YP_003681870 |
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| Protein GI | 297562896 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACACCG ACGCTCCCGG CCCGTCCGGA CCGGAACTGA GGGAGTACAC GGCACTGCTG
CGCCGCCGCT GGCGGTTCGT CGGCGCCGGG GTGCTCGGCG GGCTGGCCCT GGCCTCCGCC
GCGGTGGTCG CACTCCCCGC CGCCTACACC TCCGTCTCCG CCGTCCAGGT CCAGCCCAGC
GGGATGGCCG AGTTCACCGG GGAGCGCTCC GGCCGCCTGG CCGGGGACGT CAACCTCGAC
ACCGAGGCAC AGGTCCTGCT GTCGGAGCGC GTGTCGTCCG CCGTGGCCGA GGCCCTGGCG
GAGGAGGGCG GTGCCGCGCC CTCCGTGGCG GACCTGCGCG AGCGGGTGGA CGTGAGCGTT
CCCCCCAACA GCAGCGTCCT GGAGATCAGC TACTCCGCCG GGAGCCCCGA GGCCGCGCGG
GCGGGCGCGC AGGCCTACGC CGACGCCTAC CTCGAACTGC GCCGCGAGCG GATCGACGGG
CTGATCGAGA GCCACCTGGA GGCGCTGCGC GGTGAGCAGG AGGCCCGTTA CGAGGCCCTC
GCCGAGACCG CCGGGGAGTC CGCCGCCCCC GGCGCGGACG CGCGGGTGGA GGCTCTGCGC
GCGGAGATCA CCGAGCTGGG CAACGGCATC AGCCCGCTCA GCGCCCTGGC GGAGACGGTC
GAGCCCGGCA GTGTCATCAC CCCGGCGGGG CTCCCCGAGC GCGCGAGCAG CCCGATACCC
GCCCTGTGGC TGGTCGGCGG CGCCGCGCTC GGCCTGCTGA CGGGGCTGCT GGCGGCCGTG
GTGCGCGACC GCCTCGACCC GAGGCTGCAC GACGCCGAGG AGACCGGGCG GATCGGGGCG
GTGCCGGTGC TGCTCGACCT GTCCGAGCGG GTCGGGCGCG GCCAGCGCTC CCCCGGGCTG
CTGCCGGACG GCGACCGGCG CGGGCAGCGG GTCAACGAGT TCGCGCACCT GGTGCGCGCC
CGCCTCGCCG CGGTCCCCGT TCCCGCGGCG GCCGGCGGAC CCTCGGAGGT CGCTGGGCCG
ACCGGGGCGG GTGGGACGGG GGTGTCCGAC CGCGCCGGAG CGGGCGCGGG CGGCGCCCGG
GGGGAGGGCG AACTGGCCGT GCTCCTCGGG GACGAGGAGG CGGTCCTCGG CCGCGTGCTG
CTCGTCACCG CGACCACCCC GGGCCGCGCC GGTGCGGCGA CCGCGGTGAA CCTGGCCGCC
TCCCTGGCCC GCACGGGCTC GGAGACGCTG CTGGTGTGCG CCGACCCCCG CACCGACGCG
GTCGGCGAGC TGCTGGGGCT GCCGGAGGGC CCCGGCCTGG CCGAGGCGCT GCTGGAGGGT
GAGGACCCCG CCGACCTGGA GGTGCGGCCC GACGCGGTGC CCCGTCTGCG GGTGCTGCGC
TACGGGTCGC CGGGTATGGA CGCGCCGGTG CAGGGCACCG CCATGCCGGA ACTGGTGCGG
CTGCTGCGGG CGGGGGCGGA GTACGTGGTG GTGGCGGTGG CGCCGGTGAG CGAGCGGGCC
GACGCGCACG CGCTGGCCGG TTCGGCCGAC CTGATGCTGC CGGTGGTCGA ACTGGACCGC
ACGCGCCGCG CCGAACTGGG GGAGCTGCTC GTCCTCGCCG ACCGGTTCGG GGTTCCCGTT
CCGGGCACGG CCGTGCTGCC GCGCCAGCCG CTGGCCGGAC CCGCGCCGGT GGCGTCGCCG
TCCGCGGCCG AGCCGGTCGC CGGGGAACAG ACCACCGGGC CCGACCGCAC GCCCGGAAGG
GACGGAGCGG CCGGGGCGGA CGAGGCGGCC GGGGCCGCGA AGGGCCGCGC CGGTGCGGGG
ATCACGCTGA CCGGCATCGT CAGCGAGCTG CCCGCCACCG CCGGGACCGC GGGGACGCGG
GGGCGCGGCG GGGCGGCCCG GCCCCCGGCT CCCAGGGACG CCGAGGGTGT CCCCGGGGTT
CCCGGTCCCC GGCGGGCGGA GGCCGCGGAG GAGCCCGAGG CCGCGGAGAG CGGGAGGAGC
ACGGCCGACG GTGCCGCCGG CACGCCTTCG CGGGCTCGCG ACGGGGACGC GGAGTCCGCG
GTCCCGGGCG GCGGCGAGCG CGCCGGTGAC GAGCGCGCCG GAGGCGACGA CACCGCCCAG
GAGCGCTCCG GGGTGTCCGA AGCCGAGACG GCCGAGCGGA TCGCGGAGGC GGCCGGGGCG
GACGACGGCA CCGCGCAGGA CGCGGCGGCC CCCCGCGACG GCGGGATACC CGCGGGCCTG
GAGGTCCCCC GCGTGCTGGG AGGCGACGGC GCCACCCAGA TCCCGGTGAC GCCCGAGGCC
GCCGGGACCG GCCGGACCGA GGAGGACGCC GCGGCCCCGG GTACGGCCTC GGAGGCGGAG
ATGGCCTTCG GGCTGGCCCG GACCGCCGAG GCGCGGGAGC CCCACGACCC CGAGGCGACC
GTCAGCGGCG CCGAGGCCAC GGAGGCCCTC GTGGCCTTCG CGGCCGAGGG GGCCGAGGGG
GCCGAGGAGT CCCGGCCGAC CGGAGCCGCC GGGGACTCCG ACTCCCCGGA CAGCGCCCCT
GACACCGCCC CGGACACGGC CCCGGGGACA CGGAACTGA
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| Protein sequence | MDTDAPGPSG PELREYTALL RRRWRFVGAG VLGGLALASA AVVALPAAYT SVSAVQVQPS
GMAEFTGERS GRLAGDVNLD TEAQVLLSER VSSAVAEALA EEGGAAPSVA DLRERVDVSV
PPNSSVLEIS YSAGSPEAAR AGAQAYADAY LELRRERIDG LIESHLEALR GEQEARYEAL
AETAGESAAP GADARVEALR AEITELGNGI SPLSALAETV EPGSVITPAG LPERASSPIP
ALWLVGGAAL GLLTGLLAAV VRDRLDPRLH DAEETGRIGA VPVLLDLSER VGRGQRSPGL
LPDGDRRGQR VNEFAHLVRA RLAAVPVPAA AGGPSEVAGP TGAGGTGVSD RAGAGAGGAR
GEGELAVLLG DEEAVLGRVL LVTATTPGRA GAATAVNLAA SLARTGSETL LVCADPRTDA
VGELLGLPEG PGLAEALLEG EDPADLEVRP DAVPRLRVLR YGSPGMDAPV QGTAMPELVR
LLRAGAEYVV VAVAPVSERA DAHALAGSAD LMLPVVELDR TRRAELGELL VLADRFGVPV
PGTAVLPRQP LAGPAPVASP SAAEPVAGEQ TTGPDRTPGR DGAAGADEAA GAAKGRAGAG
ITLTGIVSEL PATAGTAGTR GRGGAARPPA PRDAEGVPGV PGPRRAEAAE EPEAAESGRS
TADGAAGTPS RARDGDAESA VPGGGERAGD ERAGGDDTAQ ERSGVSEAET AERIAEAAGA
DDGTAQDAAA PRDGGIPAGL EVPRVLGGDG ATQIPVTPEA AGTGRTEEDA AAPGTASEAE
MAFGLARTAE AREPHDPEAT VSGAEATEAL VAFAAEGAEG AEESRPTGAA GDSDSPDSAP
DTAPDTAPGT RN
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