| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3924 |
|---|
| Symbol | |
|---|
| ID | 9247795 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 4696565 |
|---|
| End bp | 4697515 |
|---|
| Gene Length | 951 bp |
|---|
| Protein Length | 316 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 73% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, LysR family |
|---|
| Protein accession | YP_003681827 |
|---|
| Protein GI | 297562853 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGTTCC AGCAGCTGGC CTACTTCGTC GCGGTGGCCC GCACACGCCA TTTCACCCGC
GCAGCAGAGC TTTCGCGCGT CGCACAGCCC AGTCTGAGCA AGCAGATCCG CAGCCTCGAA
CAGGAGCTGG GTGCGCCGTT ATTCAGTCGT GCCCGGGGAA ACATCACACT CACACCGGCC
GGCGAGGCGC TGCTTCCGCT CGCCCAGCGC ATGCTCGCCG ACCTGGAGAC GGCCCGGCGC
GAGGTCGCCG AACTGGCCGG GGTGCGCCGG GGCCGCGTGC GGCTGGGCGC GACCCCGTCG
CTGTGCGCGG GGCTGCTGGC CGACGTACTC GCCGACTTCC ATACCCGCTT CCCCGGTATC
GAACTCCAGG TGGAGGAGAG CGGTTCGCGC GACCTCATCC GCGACCTGGG GCGGGGCGAG
CTGGACCTGG CGCTGATCAT CCTGCCGCTG CACAGCAGCG ACCCCGACTT CTCCACGACG
CCGATCCTGC GGGAGAACCT GGTGGTGGCG AGCCCGATGT CGGGCCCCTC CCCCAACGGG
CGGGCCTCGA TCCGCATCAC CGAGCTGCGG GGCCGCCCGC TGGTGATGTT CCGGCGCGGC
TACGACGTGC GCGAGGCGAC GCTGCGCGCG TGCCGGGCGT CCGGGTTCGA GCCCGAGCTG
GCCGTGGAGG GCGGGGAGAT GGACGCCGTG CTGCGGTTCG TGGAGGCGGG CATGGGGCTG
GCCGTGGTGC CGAGCATGGT GCTGCGCAAC CGGCAGAGCC TGCGCGGAAC CCCGCTGGCC
CGGCCGCGCC TGCTGCGGAC GGTGGCGCTG GCGCGGCGCC GGGACGTGGA GCCCTCGCAC
TCGGCGGAGG CGTTCCGCCG GCACCTCAAC GGCTACCTGC TGGGCATGTC GCCGCAGGAC
CTGGGCCCGG ACCTGGAGGT CCTGCTCTCC CCCGAGGACG GGGCGGACTG A
|
|---|
| Protein sequence | MQFQQLAYFV AVARTRHFTR AAELSRVAQP SLSKQIRSLE QELGAPLFSR ARGNITLTPA
GEALLPLAQR MLADLETARR EVAELAGVRR GRVRLGATPS LCAGLLADVL ADFHTRFPGI
ELQVEESGSR DLIRDLGRGE LDLALIILPL HSSDPDFSTT PILRENLVVA SPMSGPSPNG
RASIRITELR GRPLVMFRRG YDVREATLRA CRASGFEPEL AVEGGEMDAV LRFVEAGMGL
AVVPSMVLRN RQSLRGTPLA RPRLLRTVAL ARRRDVEPSH SAEAFRRHLN GYLLGMSPQD
LGPDLEVLLS PEDGAD
|
|---|
| |