Gene Ndas_3890 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3890 
Symbol 
ID9247761 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4662945 
End bp4663619 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content78% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003681793 
Protein GI297562819 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACCACC TCGGAGAGCG GCTCTCCGCG CTCGTCGACG GCGAGCTCGG CCCGGTCGAC 
CACGAGAGCG CCCTCATCCA CCTGGCCAAG TGCGAGTCGT GCCGCTTCGA GGCCGACATG 
ATGCGCCGCC TCAAGCGCCG CCTGCACGGC CTGTGCGAGC CCGAGCCCGA CATGGACTTC 
ATGGGACGGC TCACCAGCCT GTCCCGCGAC CACGGACCCT CGGACCGGGG CCCCTCCGGC 
CCCTCCGTCG GCGGAACCGG CTTCGGCAGC AGTCCGCCCC TGGGCTCCTC GCGCCCCCTG 
GGCGGCTTCC CCGGCGGCGC CCTGGCCGCC GTGCCCCCGA CCGCGGGGGG CACTCCGCCC 
GCCGCGGGCG GCCCGGCCCC CTCACGGCCG GAGCGCGCCG CCGCGCCCGG GCGCCGCCGC 
CGCGGCGACC GCCTCGCGCA CCTGTTTCCG GCCTTCCCCG GCGGCCGCTA CGCCGTCGCG 
GGCTTCGCCG TGGCCACGGC CCTGCTCGGC AGCGCGTTCG TGGCCGGGGG CGAGGCCGAG 
GAGACGCCCG TGGTCGAGCC CCGCCTGGCC GACTACGCGG TCGAGCACGC GTTGACCAGC 
CGCAACATCC CGGTGGTCGA CGCGCGGCCC ACCGCCGCCG AAGCCCCCCA CGGCCCCACC 
GAAACCACCC GGTGA
 
Protein sequence
MDHLGERLSA LVDGELGPVD HESALIHLAK CESCRFEADM MRRLKRRLHG LCEPEPDMDF 
MGRLTSLSRD HGPSDRGPSG PSVGGTGFGS SPPLGSSRPL GGFPGGALAA VPPTAGGTPP 
AAGGPAPSRP ERAAAPGRRR RGDRLAHLFP AFPGGRYAVA GFAVATALLG SAFVAGGEAE 
ETPVVEPRLA DYAVEHALTS RNIPVVDARP TAAEAPHGPT ETTR