Gene Ndas_3879 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3879 
Symbol 
ID9247750 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4650120 
End bp4651451 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content73% 
IMG OID 
Productnucleotide sugar dehydrogenase 
Protein accessionYP_003681782 
Protein GI297562808 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTCGAAG CGGACCGTAT GCGCGTCTCC GTCATCGGTA CCGGGTACCT GGGTGCCACC 
ACCGCGGCCT GCCTGGCCGA GATGGGGTTC GAGGTCCTGG GACTCGACGT CGACGAGGCC
AAGATCGACA TGCTCCGCTC CGGCAGGGTC CCCTTCTTCG AGCCCGGGCT CGAAGAGCTG
CTCACCGCGA ACCTGGGAAC CGGCCGCCTG CACTTCACGA CCTCCTTCGC CGAGGCCGCG
GAGTTCGCCG ACCTGCACCT GATCTGCGTG GGCACCCCTC AGCGCGACGA CTCCGGCGCG
GCCGACCTGC GCTACGTCAA CGCCGCGGTG GACCAGCTGG CCCCGCACCT GACCCGCCCC
ACCGTGGTCG TGGGCCGCTC GACCGTTCCG GTGGGCACCG CGGCGACCCT GGCCGCCCGG
CTGTCCGCGC TGGCCCCCGT GGGCGAGGAG GCCGAGCTGG GGTGGAGCCC GGAGTTCCTG
CGCGAGGGCT TCGGGGTGGA GGACACCCTG CACCCGAACC GGATCGTGAT CGGCACCGAC
TCCCCCCGGG TCGAGAAGGC CGTGCGCGCC CTGTGGCAGC GCCAGATCGA CGACGGCGTC
CCCTTCCTGC TGACCGACCT CCAGACCGCC GAGCTGGTCA AGGTGTCGGC CAACGCCTTC
CTGGCCACGA AGATCTCCTT CATCAACGCC ATGGCGGAGG TGTCGGAGGT GGCCGGGGCC
GACGTCATCC AGCTGGCCGA GGCGCTGTCC TACGACGACC GCATCGGCGG CAAGTTCCTC
GGCCCGGGCC TGGGCTTCGG CGGCGGCTGC CTGCCCAAGG ACATCCGCGC GTTCATGGCG
CGCGCCGACG AGCTGGGCGT GGAGCCCGCG CTGTCCTTCC TGCGCGAGGT GGACGCGATC
AACCAGCGCC GCCGCGCGCG CACCATCGAC ATCGCCCGCC AGCTGATCGG CGGGAGCTTC
GCCGGGCGCA CGGTGACCGT GCTGGGCGCG GCGTTCAAAC CCAACTCCGA CGACATCCGC
GACTCGCCCG CCCTGGACGT GGCCTCCACC ATCGCCTCCC TGGGAGCGCA GGTGACGGTG
TACGACCCGC GGGCGCTGGA GCGGGCGCGC GAGGCGCACC CGGAGCTGAA CTACGCCGAC
TCCATGCTGG CGGCGGCGCG CGGCGCCGAC GTGGTGCTGC TGCTCACCGA GTGGGCGGAG
TTCCGCGAGG CCAACCCGGA GGAGCTGGCC GGGGTGGTGG CCCGCAAGCG CATCGTGGAC
GGGCGCAACG CGCTCGACCC CACGTACTGG CGCGCCTCGG GCTGGACCTA CCGGGCACTG
GGCCGCCAGT AG
 
Protein sequence
MVEADRMRVS VIGTGYLGAT TAACLAEMGF EVLGLDVDEA KIDMLRSGRV PFFEPGLEEL 
LTANLGTGRL HFTTSFAEAA EFADLHLICV GTPQRDDSGA ADLRYVNAAV DQLAPHLTRP
TVVVGRSTVP VGTAATLAAR LSALAPVGEE AELGWSPEFL REGFGVEDTL HPNRIVIGTD
SPRVEKAVRA LWQRQIDDGV PFLLTDLQTA ELVKVSANAF LATKISFINA MAEVSEVAGA
DVIQLAEALS YDDRIGGKFL GPGLGFGGGC LPKDIRAFMA RADELGVEPA LSFLREVDAI
NQRRRARTID IARQLIGGSF AGRTVTVLGA AFKPNSDDIR DSPALDVAST IASLGAQVTV
YDPRALERAR EAHPELNYAD SMLAAARGAD VVLLLTEWAE FREANPEELA GVVARKRIVD
GRNALDPTYW RASGWTYRAL GRQ