Gene Ndas_3807 details

Gene Information

• Locus tag: Ndas_3807
• ID: 9247678
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111
• Kingdom: Bacteria
• Replicon accession: NC_014210
• Strand: -
• Start bp: 4569029
• End bp: 4571155
• Gene Length: 2127 bp
• Protein Length: 708 aa
• Translation table: 11
• GC content: 74%
• Product: UvrD/REP helicase
• Protein accession: YP_003681710
• Protein GI: 297562736

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: 7
• Fosmid unclonability p-value: 0.00612818
• Fosmid Hitchhiker: Yes
• Fosmid clonability: hitchhiker

Sequence

Gene sequence

ATGGATCCCG ACCGCGTCCT GGAGGGACTG GACCCGGAGC AGACCCAGGC CGCACGCGCG 
CTGCGCGGCC CCGTGTGCAT CCTGGCCGGT GCCGGGACGG GCAAGACCCG GGCCATCACC 
CACCGCATCG CGTACGCGGT CTCCAGCGGT GTGGTCGCCG AGCAGCAGGT CCTCGCGGTC 
ACCTTCACCG CGCGCGCCGC CGGGGAGATG CGCGGCCGGC TGCGCGCCCT GGGCGCCCCC 
CGCGTGCAGG CCCGCACCTT CCACGCCGCC GCCCTGCGCC AGCTCTCCTT CTTCTGGCCC 
CAGGTCGTGG GCGGCGAGAA GCCCACCCTC ATCGAGAGCA AGCTCCCGGT GGTCTCCCGC 
GCCGCCCACT CGGTGGGCCT CCAGCCCGAC CGCAACGGCC TGCGCGACCT GGCCGGCGAG 
ATCGAGTGGT CCAAGGTCAC CCAGGTGCGC CCCACCGACT ACGACAAGGC CGTGGTCAAG 
GCGGGCCGCC AGCCCCCGCT GCCCGCGGGC GAGGTGGCCC GGGTCTTCGA GGCCTACGAG 
GACCTGCGCC GCGAGCACAA CCTCCTCGAC TTCGAGTCCA TGCTCGAACT CACCGCCGGC 
ATGATCACCG AGTACCCGGC CATCGCCCAG CGCGTGCGCG AGCAGTACCG GTACTTCGTC 
GTCGACGAGT TCCAGGACGT CAACCCGCTC CAGCGCCTGC TCCTGGACGC CTGGCTGGGC 
GACCGCGACG ACCTGTGCGT GGTCGGCGAC CCCAGCCAGA CCATCTACTC CTTCGCCGGG 
GCCACCCCCG GCTACCTGAC CGGGTTCGGC GCCCGCTACC CCCACGCCAC CGTGGTCCAG 
CTGGTCCGCG ACTACCGCTC CACCCCCCAG GTCGTGCGGG TGGCCAACCA CGTCATCGCC 
CAGGCGCGCG GCACGACCTC CGCCCAGCAC CTGACCCTCC AGGCCCAGCG CCCCGACGGC 
CCCGACCCGA TGTACCAGGA GTACGACGAC GAGCCCGCCG AGGCCACCGG GGTCGCCCGC 
AAGATCAGCG TCCTGCTGGA GGGCGGCACC CCGGCCAGCG AGATCGCGGT GCTGGTGCGC 
ACCAACGGCC AGTCGGCCTC CTACGAGCAG GCGCTGACCG ACGAGGGCGT GCCGTTCACG 
ATGCGCGGGA CCACCCGGTT CTTCGAGCGC CCCGAGATCA AGCAGGCCGT GCACACCCTG 
CGCGGCGCCC GGCACGGGGC GGCGGGGGAG GAGGCCGAGC CCCTGGTGCG CACCGTCCGC 
CAGCTGCTCG GACAGCTCGG CCTGACCGAG AGCGCGCCCG AGGGGCGCCA GGCCCGCGAA 
CGCTGGGAGT CGCTGACCGC GCTGGCCCAG CTGGCCGAGG ACATGGCCGC CGCGCCGAGG 
CCCGACGGCA GTCCGGTGAC CATGGCCGAC CTCGTGGACG AGCTCGACGT GCGCATGGCC 
ACCGAGCACG CGCCCGGCTT CGAGGGCGTC ACCATCGCCT CCCTGCACGC GGCCAAGGGC 
CTGGAGTGGG ACGCCGTCTT CCTGGTCGGT CTCACCGAGG GCATGATGCC GATCATCTAC 
GCCGAGACCG ACGAGCAGGT GGAGGAGGAG CGCCGCCTGT TCTACGTGGG CGTCACGCGG 
GCCCGCGAGC ACCTGGCGAT GTCGTGGTCC CTGGCCCGCT CGCCCGGCGG CAGGAAGACC 
CGCAAGCCCT CCCGCTTCCT CGACGGCCTG CGCCCCGCCT CCCCGTCCAC CGCCTCCCGG 
CGCGCCGAGC GCCGCAAGGG CGGCGTGACC CGCTGCCGGG TGTGCTCGGC CACCCTCACC 
GACGCGGCCG AGCGCAAGCT GGGCCGCTGC CTGGACTGCC CCTCCAGCTA CGACGAGGCC 
CTGCTGGAGC GGCTGCGCGA CTGGCGCCGC GCGTGCGCGC AGGAGCAGAA GGTGCCCGCC 
TACGTGATCT TCACCGACGC CACCCTCCAG GCCGTCGCCG AGCAGGAGCC CGGCAGCCTC 
ACCCAGCTGG CGGCGGTGTC CGGTGTCGGC GCGGTCAAGC TCGATCGCTA CGGTGAGGCG 
GTACTGGCGC TGGTGGCGGG CGCGGACCCG GCGGACGTCA TGGACCGCCG GACCGAGGAC 
GACGGGGAGG AAGCGGCGGA TGAGTGA 

 

Protein sequence

MDPDRVLEGL DPEQTQAARA LRGPVCILAG AGTGKTRAIT HRIAYAVSSG VVAEQQVLAV 
TFTARAAGEM RGRLRALGAP RVQARTFHAA ALRQLSFFWP QVVGGEKPTL IESKLPVVSR 
AAHSVGLQPD RNGLRDLAGE IEWSKVTQVR PTDYDKAVVK AGRQPPLPAG EVARVFEAYE 
DLRREHNLLD FESMLELTAG MITEYPAIAQ RVREQYRYFV VDEFQDVNPL QRLLLDAWLG 
DRDDLCVVGD PSQTIYSFAG ATPGYLTGFG ARYPHATVVQ LVRDYRSTPQ VVRVANHVIA 
QARGTTSAQH LTLQAQRPDG PDPMYQEYDD EPAEATGVAR KISVLLEGGT PASEIAVLVR 
TNGQSASYEQ ALTDEGVPFT MRGTTRFFER PEIKQAVHTL RGARHGAAGE EAEPLVRTVR 
QLLGQLGLTE SAPEGRQARE RWESLTALAQ LAEDMAAAPR PDGSPVTMAD LVDELDVRMA 
TEHAPGFEGV TIASLHAAKG LEWDAVFLVG LTEGMMPIIY AETDEQVEEE RRLFYVGVTR 
AREHLAMSWS LARSPGGRKT RKPSRFLDGL RPASPSTASR RAERRKGGVT RCRVCSATLT 
DAAERKLGRC LDCPSSYDEA LLERLRDWRR ACAQEQKVPA YVIFTDATLQ AVAEQEPGSL 
TQLAAVSGVG AVKLDRYGEA VLALVAGADP ADVMDRRTED DGEEAADE