| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3797 |
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| Symbol | |
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| ID | 9247668 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 4560404 |
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| End bp | 4561477 |
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| Gene Length | 1074 bp |
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| Protein Length | 357 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | |
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| Product | PDZ domain-containing protein |
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| Protein accession | YP_003681701 |
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| Protein GI | 297562727 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.0263048 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGTC GTGCCATGAC CCTCGTTGTC GCGCTCGTCC TCCTCGTCGG GCTCGGGATC
GGCAGCCTCC ACCTGCCCGT GCCCTACCTG GTCGCCGCGC CGGGCCTGAC CGTCAACACG
GTCGGGGAGA CCGACCGCGG GCAGGTCATC GAGATCGAGG GCGCCGAGAG CTACGAGCAC
GACGGCACCC TGTCCATGGT GACCGTGCAG TACGCGGGCG GGCCCGGGCA CCGGCTCGAC
TTCCTCACCG TCGTCACCGC CTGGCTCTCG CCCACCCAGG CGGTCCTGCC CGAGGAGCTG
CTCTTCCCAG CCGGGCGCAC GCCCGAGGAG GTCACCGAGC GCCAGACGGT GCAGATGAAC
GACTCGCAGA CCGACGCCAC CGCCGCCGCG CTCACCCAGC TCGGCATGGA GTACGAGGCG
GTCCCCGTGG TCAGCGGCAC CCTGGAGGGC ATGCCCGCGC ACGGCGTGGT GGAGGCGGGC
GACACGGTCG TGGCCGTGGA CGGCGAGCCG GTGCCCACCC AGGGCGGCGA CCCCGACGTC
CCCGCCGGCA GCGCCGCGGT CGTGGAGATG GTCGGCGACC GCGAGCCCGG CGACCCGGTG
GGACTCACCC TGGAGCGCGA CGGCGAGACC GTCGAGGTGG AGGTCGCCAG CGAGGAGGGC
GACTCCGGCG GCGCCGCGAT CGGCGTGCTC ATCGCCGACG AGACCGACTT CCCCGTGGAC
GTGGAGATCA CGATCGGCGA CATCGGCGGG CCCAGCGCGG GCATGATGTT CGCGCTCGGG
ATCATGGACC GGCTCAGCGA GGAGGGCCTC ACCGGCGGCG CGGCCGTCGC CGGGTCGGGC
ACCATCACCG CCGACGGTCG GGTGGGCGGG ATCAGCGGCA TCCCGCAGAA GATGGTCAGC
GCCCAGCGCG ACGGCGCCGA GTACTTCCTC GTGGCCGCCG ACAGCTGCTC CCAGGTCGCC
CAGTCGGCCG CCTACGGCGA ACTGGAGGTG GTCCGGGTGG AGACCCTCGA CGACGCGGTC
GCGGCCCTGG AGACCATCCG CACCGGCGAG GGCGAGCTGC CGCGCTGCGA GTAG
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| Protein sequence | MLRRAMTLVV ALVLLVGLGI GSLHLPVPYL VAAPGLTVNT VGETDRGQVI EIEGAESYEH
DGTLSMVTVQ YAGGPGHRLD FLTVVTAWLS PTQAVLPEEL LFPAGRTPEE VTERQTVQMN
DSQTDATAAA LTQLGMEYEA VPVVSGTLEG MPAHGVVEAG DTVVAVDGEP VPTQGGDPDV
PAGSAAVVEM VGDREPGDPV GLTLERDGET VEVEVASEEG DSGGAAIGVL IADETDFPVD
VEITIGDIGG PSAGMMFALG IMDRLSEEGL TGGAAVAGSG TITADGRVGG ISGIPQKMVS
AQRDGAEYFL VAADSCSQVA QSAAYGELEV VRVETLDDAV AALETIRTGE GELPRCE
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