Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3620 |
Symbol | |
ID | 9247489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 4341857 |
End bp | 4343341 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | |
Product | amino acid permease-associated region |
Protein accession | YP_003681526 |
Protein GI | 297562552 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGTGGACC AGAAGAGCCC GGCGGGCACC CGCGGGGCCG CAGGCCCGGG CGGTGCGCCC GCGCTGAGGC AGCGCCTCAC CAGGCGCAAG CCGATCGAGA GGCTCGTCGC CGAGACCCGG GACTCCGAGG GCAGCGGCCT CCAGCGGCAC ATGGGCTTCT GGCAGCTGTC CATGATCGGG ATCGGCGCCA CCCTGGGCAC CGGCATCTTC GTCGTGCTGG GCGAGGCCGT CCCCGTCGCC GGACCGGCCG TCATCGTCTC GTTCGTGCTC GCCGGGATCA CCGCGCTGTT CTCCGCGCTC GCCTACGCCG AGATGGCCGG GATGATCCCC GCCTCCGGCT CCGCCTACTC CTACAGCTAC GCCACCATCG GCGAGTTCAT GGCCTGGGTG TGCGGCTGGT GCCTCATGCT CACCTACGGG GTGTCGGTCG CCGCGGTCGG TGTCGGCTGG GGCGAGTACA TCAACGAGCT CCTCCAGCTC ACCACCGGCC TGTCCCTGCC GGGCGCGGTG CTCTCCGGTC CTCTGGAGGG CGGTGTGATC AACCTGCCCG CCGCCGTCGT GGTCCTGCTG TCCATGTTCG CCCTGCTCGC CGGGGTCCGC GAGAGCAGCC GCGTCAACGC CGTCATGGTC GCCGTCAAGG TCGCCATCCT GGTGATGTTC GTGGCCATCG CGATCACCGC CGTCCAGGAC GGCAACTTCG CCCCGTTCAT GCCGATGGGC ATGGCCGGTG TCAGCGCCGC GGGCGCCACC CTGTTCTTCT CCTACATCGG CTTCGACTCG GTCTCCACCG CGAGCGAGGA GGCCAAGAAC CCGCAGCGCG ACCTGCCCCG GGCGATCATG TTCGCGATGA TCCTGGTCAC CGCGCTGTAC TGCCTGGTCG CCTTCGCGGC GGTCGGCGCG CTCGACTGGA CCGGCTTCGT CGACGGCGAG ACCTCCCTGG CGGGCATCCT GACCGCGGTC ACCGGCACCC CCGTGTGGGC GGTCATCTTC GCCGCCGGTG CGGTCCTGGC CCTGGCCAGC GTGGTCCTGG TCGTGCTCTA CAGCCAGACC CGCATCCTCT ACGCCATGTC GCGCGACGGC CTCATCCCCA AGGCCTTCTC CACCCTCGAC GCCAAGGGCA CCCCGCGCGC GAACACCCTC ATCACCTCCG TGCTCATCGC GGTGCTCGCC GCCCTGGTCC CGCTCGGGCC GCTCGCCGAC GCCACCGCCA TCGGCACCCT CTTCGCCTTC GCCCTGGTCA ACGTGGCCGT CCTGGTGCTG CGGCGCAGCA GGCCCGACCT GCCGCGCGCC TTCCGCGTGC CGGGGGCGCC GGTCACGCCG GTCCTGGGCG TGCTGGCCTG CGCCTACCTC ATGTTCAGCA TGTCGATGAG CGTGTGGGTG GCCTTCCTGG TCTGGCTCGC CGTCGGCGTG GCGATCTACT TCGCCTACAG CATGCGCCGC TCCGCGCTGG AGACCGACCC CGAGGTCAGC GAGGTCCGCT CCTAG
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Protein sequence | MVDQKSPAGT RGAAGPGGAP ALRQRLTRRK PIERLVAETR DSEGSGLQRH MGFWQLSMIG IGATLGTGIF VVLGEAVPVA GPAVIVSFVL AGITALFSAL AYAEMAGMIP ASGSAYSYSY ATIGEFMAWV CGWCLMLTYG VSVAAVGVGW GEYINELLQL TTGLSLPGAV LSGPLEGGVI NLPAAVVVLL SMFALLAGVR ESSRVNAVMV AVKVAILVMF VAIAITAVQD GNFAPFMPMG MAGVSAAGAT LFFSYIGFDS VSTASEEAKN PQRDLPRAIM FAMILVTALY CLVAFAAVGA LDWTGFVDGE TSLAGILTAV TGTPVWAVIF AAGAVLALAS VVLVVLYSQT RILYAMSRDG LIPKAFSTLD AKGTPRANTL ITSVLIAVLA ALVPLGPLAD ATAIGTLFAF ALVNVAVLVL RRSRPDLPRA FRVPGAPVTP VLGVLACAYL MFSMSMSVWV AFLVWLAVGV AIYFAYSMRR SALETDPEVS EVRS
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