Gene Ndas_3564 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3564 
Symbol 
ID9247433 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4273472 
End bp4275655 
Gene Length2184 bp 
Protein Length727 aa 
Translation table11 
GC content75% 
IMG OID 
ProductMMPL domain protein 
Protein accessionYP_003681471 
Protein GI297562497 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.643651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACAAGG ACAACGGCAG ACCACCTGCC GGGCGGTCGC GCTGGTGGAT CGGAGCGGCC 
CTGCTGGTCG CCCTGGTGTG GTTGGCGGGC GCCGGGCCCC TGGGCATGTT CCTGGGCAGG
CTCGGCGAGG TGCAGACCAA CGACCCGGGC GCGTTCCTGC CGGTGGGCGC CGAGTCCACC
GAGGTCAGTG AGATCGCCGA GGAGTTCGAC CGCGAGGAGG CGGTCCCGGC CGTCGTCGTG
TACTCGCGCG AGGACGCCGG GGACGGCGGG GGCGGGGCGC TCGGAGAGGG CGAACTCGCC
GACGTCGCCG CGGTCGCCGA GCGCGTGGGT GAGGAGCCCT GGGTCTCCGG AGCCGTCGTC
GGCCCCTTCC CCGGGACCGA GGACCCCTCC GTCGCCCAGT TCGTGGTGCC GCTCGACCCG
GCCGCCGACA CCGGCGACGC GGTCGAGGAC CTGCGCGCGG TGCTGGCCGA CGACCCCGTG
TCGGGACTCC AGGTGCAGGT CACCGGCCCC GCCGGTTTCG CGGCCGACCT CGCCGCGGCC
TTCGGCGGCA TCGACTCCAC GCTGCTGATC GTGGCCATCA CCGCCGTGCT GATCATCCTC
GTGGCCGTCT ACCGCTCACC GCTGCTGCCG GTCCTGGTCA TCCTCGCCTG CCTCCTCGCG
CTCGGCCTGT CCGGCGCGCT GGTCTACCTG GCCGCCGACA CCGGCCTGGT CAGCCTCAAC
GGGCAGAGCC AGGGCATCCT GTTCATCCTG GTCGTGGGCG CCTGCACCGA CTACGCGCTG
CTGCTCGTGG CCCGCTACCG CGAGGAACTG GCCGTCCGCG ACCGCGTGCC CGAAGCCGTC
ATGGCCGCCG TGCGCGGCGT GACCGGGCCC GTCCTGGCCT CCGGCGGAAC CGTCATCCTC
GGCCTGCTCT GCCTGCTCGC CGCCGACCTG GCCTCCACCC GCAGCCTCGG TCCCGTGGTG
GCCATCGGCG TCGTCGCGGC CCTGCTCTCG GCGATGACCT TCCTGCCCGC CGTGCTCGCC
CTGTGCGGAC GCGCCGCCTT CTGGCCCGTG GCGCCGCACA GCGGCGGCCG TACGGACGGA
ACCCTGGACG AGGTCGTGGC CAGCCACCGG TTCTGGGGCC GCCTGGCGAC CACCGTCTCG
CGCAGGCCGC GCCTGTACTG GATCGTCACC ACCGCCGTCC TGGCCGCCGC GGCCGTGTTC
GCGCCCCAGT TCGACGCCGG GGGCACCGGC CAGGCCGAGG TCTTCCGCAC CGAGGTGGAG
GCGGTCGAGG CCCAGGAGGC GCTCGACCGG GGCTTCGGCT CCGACGCCAG CGCGGCCCCC
GCCCTGGTGG TCGCCGACGC CGACCACCTG GACGAGGTGG TCCGGGCCGC CGAACGCCTG
CCCGTCGTGG ACGCGGCCGC GCCGGTGACC GAGCCCGGTC CGCCCGGCGC CGACCTGCCG
CCCCTGGTGG AGGACGGACG GGTGCTGGTC GAGGTGGTCC TCACCGTCGG CCCCGAGTCG
GCCGAGGCGG TGGACGCGGT GCGCGACCTG CGCGCCGAAC TGGACTCCGT CCAGGGCGCC
GACGCCCTGG TCGGCGGGGT GAGCGCCACC GACCTGGACA CCCTGGACAC CGCCCAGCGC
GACTTCGCGG TCGTGGTGCC GCTGGTGCTC GTGGTGGTCT TCCTCGTGCT CATCCCGCTG
CTGCGCTCCC TGGTGGCGCC GCTGCTGCTG ATGGCCGTGA ACGTCCTGTC CTTCGCCGCG
GCGCTGGGCG TGGGAACGCT GCTGTTCGAC CACGTGCTCG GCCTGCCCGG CGCGGACCCG
GTGGTGCCGC TGTTCGCGTT CGTGTTCCTG GTGGCGCTGG GGATCGACTA CAGCATCTTC
CTCATGTCCC GGGCGCGTGA GGAGACGCTG CTGCACGGGC ACCGCGAGGG CGTGCTGCGC
GCGCTCACCG TCACCGGCGG GGTGATCACC TCCGCCGGGG TGGTGCTGGC CGTGACCTTC
GCGGCGCTGG CGGTGATCCC GCTGCTGTTC CTGCTCCAGC TGGCGTTCCT GGTGGCCTTC
GGTGTACTGG TGGACGCGCT GCTCGTGCGG ACCGTGCTGG TGCCCGCGCT GTCCCTGGAC
GTCGGGCCCC GTGTGTGGTG GCCCGGCCGC GCGGGCCGTG CCCCCGGGCG CGCGCAGGAG
CACGAACCCG CCGATCGCGC CTAG
 
Protein sequence
MDKDNGRPPA GRSRWWIGAA LLVALVWLAG AGPLGMFLGR LGEVQTNDPG AFLPVGAEST 
EVSEIAEEFD REEAVPAVVV YSREDAGDGG GGALGEGELA DVAAVAERVG EEPWVSGAVV
GPFPGTEDPS VAQFVVPLDP AADTGDAVED LRAVLADDPV SGLQVQVTGP AGFAADLAAA
FGGIDSTLLI VAITAVLIIL VAVYRSPLLP VLVILACLLA LGLSGALVYL AADTGLVSLN
GQSQGILFIL VVGACTDYAL LLVARYREEL AVRDRVPEAV MAAVRGVTGP VLASGGTVIL
GLLCLLAADL ASTRSLGPVV AIGVVAALLS AMTFLPAVLA LCGRAAFWPV APHSGGRTDG
TLDEVVASHR FWGRLATTVS RRPRLYWIVT TAVLAAAAVF APQFDAGGTG QAEVFRTEVE
AVEAQEALDR GFGSDASAAP ALVVADADHL DEVVRAAERL PVVDAAAPVT EPGPPGADLP
PLVEDGRVLV EVVLTVGPES AEAVDAVRDL RAELDSVQGA DALVGGVSAT DLDTLDTAQR
DFAVVVPLVL VVVFLVLIPL LRSLVAPLLL MAVNVLSFAA ALGVGTLLFD HVLGLPGADP
VVPLFAFVFL VALGIDYSIF LMSRAREETL LHGHREGVLR ALTVTGGVIT SAGVVLAVTF
AALAVIPLLF LLQLAFLVAF GVLVDALLVR TVLVPALSLD VGPRVWWPGR AGRAPGRAQE
HEPADRA