Gene Ndas_3454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3454 
Symbol 
ID9247322 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp4140144 
End bp4141157 
Gene Length1014 bp 
Protein Length337 aa 
Translation table11 
GC content69% 
IMG OID 
Productintegrase family protein 
Protein accessionYP_003681364 
Protein GI297562390 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCGGGT CTGGTTCGGT GTTCAAGCGG TGTGGGTGTC GTTTGCCTGG TACCTCGAGG 
AAGGTCGGGG GCAGGTGTCC GCGGTTGCGG TCTCGCGGGC ATGGGAGCTG GTACTTCTCG 
GCCGAGTTGG AGCATGTTCC GGGTCGGCGG TGCCGGGTGC GTCGTGGTGG GTTCGCTTCC 
CGGGATGCAG CGCGCGCGGC GCTGCGCAGG GCCCAGGGCG TGCAGACAGA TGCGGCAGGT 
CCGGTGGTGT GGACGGTAGG GGAGTGGCTC CAGCACTGGT TGGACACTCG GACCCGGTTG 
CGGCCGCGCA CCAGGGTCGG CTACGGCGAG CACATCGAGC GTTACCTCAA GCCCTCGCTG 
GGCGCAGTGC TGTTGGAGGA GTTGACACCT GCCCAGGTGC AGGAGGCGTT CGATGCGATC 
TCGTGCCGCA CCACCCCGGT GGGGGATCGG CTTTCCCCGG CGACGGTGCG GCGGATCCGC 
GCCACGTTGC GGGCGGCGTT GAACACCGCG GTGCGTGAGC GGTTGCTGCC TTCCAACCCC 
GCTCGAGGCC TGCGGTTGGA GTCGGGGGTG GGTACGCGGC CGGTGGTGTG GACCGACCAG 
GCGGTGGCCG AGTGGACCCA TAGCCGGATG CGGCCGGCGG TGGCGGTGTG GACGGTCGAG 
CAGACCCGCG CTTTCCTGGA CTTCGTGTCC GACCACCGGC TGTATGCGTT GTTTCACCTG 
CTGGTGATGA CCGGGCTGCG GCGGGGCGAG GTGGTGGAGT TGAAGGTGGT GCAGGCGATG 
TTGGGGCACG CGAGCATCGT GTTGACTGCG GACACCTATG CCAGCGTTCT CCCGGAGGTG 
GCACAGGAGG CGGCGGAGCG AACCGCGTGG CTGGTGTTGC GGGACGCCGG GAGGGCCGGT 
CGGCATACGA AGAGGCGGCG TGGTCGACGT GCTCTGGTGT TGGTCCCACC TGGGTCCCAC 
CCTGGACCCA CCGGCAGGAC TACTCCCTCA GGCTCTGGCC AGACAAGGCT GTGA
 
Protein sequence
MSGSGSVFKR CGCRLPGTSR KVGGRCPRLR SRGHGSWYFS AELEHVPGRR CRVRRGGFAS 
RDAARAALRR AQGVQTDAAG PVVWTVGEWL QHWLDTRTRL RPRTRVGYGE HIERYLKPSL 
GAVLLEELTP AQVQEAFDAI SCRTTPVGDR LSPATVRRIR ATLRAALNTA VRERLLPSNP 
ARGLRLESGV GTRPVVWTDQ AVAEWTHSRM RPAVAVWTVE QTRAFLDFVS DHRLYALFHL 
LVMTGLRRGE VVELKVVQAM LGHASIVLTA DTYASVLPEV AQEAAERTAW LVLRDAGRAG 
RHTKRRRGRR ALVLVPPGSH PGPTGRTTPS GSGQTRL