Gene Ndas_3417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3417 
Symbol 
ID9247284 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand+ 
Start bp4087257 
End bp4088084 
Gene Length828 bp 
Protein Length275 aa 
Translation table11 
GC content68% 
IMG OID 
ProductNERD domain protein 
Protein accessionYP_003681328 
Protein GI297562354 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.977584 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATCGAA CTAACCTGTC CGACGTGAAA TCGGCTACCA GAGTGAACGG CTCCACTCCA 
ACGTCCGGGG GATCGGACCC CGAAAGGCCC GAATCCCTCT TTTTCCCCAA TCAGAGAAAG 
AAGAAGGACA CCTCGGGCGG CAAGGCGGTC TACGGTGCCC TGCGCTCCAA CCGTTCCGTC 
CGCAGGTGGG TGGTACGCGG CGGCGGCGCC GCCGTGGTGG CCGTCCTGAT CGGCCTGCTC 
ACCTCCGACT GGCGGATCGG CGTCACCTTC GGCGTCCTCA CCCTGGCCGG GATCATGGTG 
TACGCCTCCC GGCGCGAGTC GGAGATCCCG CGCTGGCGCA AGCCCTCGGC GGCCCAGCGC 
AAGACCGAGG CGCAGCTCAA GGTGATGAAG CAGCTCGGCT ACCGCGTCCT GCACGCGCGC 
GCGGTGCCCG GCGGCAACGG CCAGATCGAC CACTTCATCG TGGGCCGGCG GGGCGCGTTC 
GCCATCGACT CCGAGTCGTG GGACAAGCGG CTGCCGCTGC GCAACAAGCT GGAGAAGCTC 
TACCACGGGC GGTTCAGCAA GAACGAGCGC ATCGACGAGG CCCTGGAGGA GGCCAAGCGG 
GCGCAGGACC TGATCAGCTC CGAACTGGGG CGCGAGATCA AGGTGCGCGC GTCGCTGGCC 
ATCTACGGAC CCGGCATGCC CTGGGACAGC CACCGGCTGC GGGGCGTGGA CATCATCACC 
GGCACCAAGG TCCGCAAGTG GCTGCGCAGC GGCCGGGACC GCCTGACCGA GAAGGAGATC 
GAGGAGATCT ACCAGGCCGC GATGAAGGCC CTGCCGCCCA GGTACTGA
 
Protein sequence
MDRTNLSDVK SATRVNGSTP TSGGSDPERP ESLFFPNQRK KKDTSGGKAV YGALRSNRSV 
RRWVVRGGGA AVVAVLIGLL TSDWRIGVTF GVLTLAGIMV YASRRESEIP RWRKPSAAQR 
KTEAQLKVMK QLGYRVLHAR AVPGGNGQID HFIVGRRGAF AIDSESWDKR LPLRNKLEKL 
YHGRFSKNER IDEALEEAKR AQDLISSELG REIKVRASLA IYGPGMPWDS HRLRGVDIIT 
GTKVRKWLRS GRDRLTEKEI EEIYQAAMKA LPPRY