| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3407 |
|---|
| Symbol | |
|---|
| ID | 9247274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4073747 |
|---|
| End bp | 4074850 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | protein serine/threonine phosphatase |
|---|
| Protein accession | YP_003681318 |
|---|
| Protein GI | 297562344 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.389511 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCCA CACCGACCGC CAAGACCACC CGGCTACTGC GCTCCACCGC GCAGCGGCTC
GTCGCGGTGC TCCGGCGCAA GGTGCTGTTC CGTTACCGGC TCGTCCTGAT CACCCTCGTC
GCCCTGGCCG TCGGCATCGG CGTCGGTGCC GTGTGGGGTC CCACCGGCTG GTTCCCGCCC
AGTTCCACCA TCCTCACCGT CCTCGCGGGC GGCCTCCTCC TCAAGCGCAA GAGCCTGGCC
TTCCTGCTGG CCGTGGTCGC CGCCGTCCTG GTCTTCGTCG CCTTCATGCT CGACTTCGGC
CAGGTGGGCC CCGGCCTGCT GGTCACCATC GGCGTCACCG CGGTGCTGTC CTACCTGCTG
TCCGGGGTGC GCGAGCGCCT CGGCGTCCAG GGCCTCAGCG GCGAGATGAT GCTGCTGGAC
CTGCGCGACC GCCTGCGCCG CCAGGGCAAG CTGCCCCGGC TGCCCGAGGG CTGGGGGCGC
ACCGCGGTCC TGCGCCAGGC GGGCGGCTCG TCCTTCGGCG GCGACTTCGT CGTCTCCATC
CGCAGGGAGA ACCGGCTGGA CGTGGCCGTC GTGGACGTCT CCGGTAAGGG AGTGGACGCC
GGAACCCGGG CCCTGCTGCT CTCCGGCGCC TTCAGCGGGC TGATCGGGGC CGTCCCCACC
CGCGACTTCC TGGCCCACTG CAACGACTAC CTCATGCGTA ACAGCGGCGG CGAGGGCTTC
GTCACCGCCG TGCACCTGAG CGTGGACCTG GACACCGGCG AGTACCAGAT CGCCTCCGCC
GGACACCCGC CCGCGCTGCA CTACGACAGC GGCGGCGGGC TGTGGAGCAC CACCGAGGCC
AAGGGCGTGG TCCTCGGCGT CATCCCCGAG ATGACCTACA CCTCCGTCGA GGGCAGACTC
CGGCCCGGCG ACGCCATCAT GCTCTGCACC GACGGCCTCA TCGAGACCCC GGGCGAGGAC
CTCGACGCCG GAATCGACCG CCTCCTCGGC GCGGCCGAGC AGCTCGTCCC GCGCGGTTTC
GCCACCGGGG CGGACGAGAT CGTGGACACC CTCAGCAGGG ACAAGAACGA CGACTGCGCC
CTGGTCGTCC TCTGGCGGGA CTGA
|
|---|
| Protein sequence | MKPTPTAKTT RLLRSTAQRL VAVLRRKVLF RYRLVLITLV ALAVGIGVGA VWGPTGWFPP
SSTILTVLAG GLLLKRKSLA FLLAVVAAVL VFVAFMLDFG QVGPGLLVTI GVTAVLSYLL
SGVRERLGVQ GLSGEMMLLD LRDRLRRQGK LPRLPEGWGR TAVLRQAGGS SFGGDFVVSI
RRENRLDVAV VDVSGKGVDA GTRALLLSGA FSGLIGAVPT RDFLAHCNDY LMRNSGGEGF
VTAVHLSVDL DTGEYQIASA GHPPALHYDS GGGLWSTTEA KGVVLGVIPE MTYTSVEGRL
RPGDAIMLCT DGLIETPGED LDAGIDRLLG AAEQLVPRGF ATGADEIVDT LSRDKNDDCA
LVVLWRD
|
|---|
| |