Gene Ndas_3400 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3400 
Symbol 
ID9247265 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp4065258 
End bp4066703 
Gene Length1446 bp 
Protein Length481 aa 
Translation table11 
GC content69% 
IMG OID 
Producttrigger factor 
Protein accessionYP_003681311 
Protein GI297562337 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGACCG ATGTCGAGGA GCTGAGCCCC ACCCGGGTCA AGCTGACCAT CGAGGTGCCC 
TTCGAGGAGC TCGATCACGC TTTCGACGTG ACCTACAAGT CGCTCGCCAA GCAGGTCCGG
ATCAAGGGCT TCCGCCCCGG CAAGGCGCCG GCGCGGCTGA TCGACCGTTA CGTCGGCCGC
GGCGCGGTGA TCAGCGAAGC GGTCAACCAC GCCGTTCCGG AGCTCTACAA CGAAGCCATC
CAGAAGGAGG AGCTCTTCGC GCTCGGCCAG CCCGACGTGG AGGTCACCAA GCTGGAGGAC
AACGACGAGC TCGCCTTCAC GGCCGAGGTC GACGTCCGCC CCAAGTTCGA GGTCGAGGAC
TACAAGGGCA TCGAGGTCAC CGTCGACAGC GCCGAGGTGA CCGACGAGCA GGTCGACGAG
CAGATCGGCA CCCTGCGCGA GCGCTTCTCC ACCCTGGTGG GCGTGGACCG CCCCGTCGAG
GACGGCGACC ACCTGTCCAT CGACCTGTCC GCCGCCGTCG ACGGTGAGAA GCTCGAGGAC
GTCGCGGTCA GCGGCTACTC CTACGAGGTC GGCACCAACA CCATGCTGGA GGGCCTCGAC
GAGACCCTGC GCGGCATGGA GGCCGGCGGC GAGGCCACCT TCTCCACCAC CCTCGTCGGC
GGTGAGCACG AGGGCCGGGA GGCGGACGTC ACCGTCACCG TGCACAGCGT GAAGGTCAAG
GAGCTGCCCG AGCTGGACGA CGAGTTCGCC CAGCTGGCCT CGGAGTTCGA CACCATCGAG
GAGCTGCGCG CGGACGTGCG CAACCGCATG GGCGAGGTCC GCCGCCTCCA GCAGCTCTCC
GCCGCCCGCG ACAAGGCCCT GGAGCAGCTG ATCGACTCCG TCGACATCCC GCTGCCCGAG
TCGGTCGTCG AGGAGGAGAT CACCCGCCGC CGCCAGAGCC TGGAGCAGCA GCTCGCGCAG
AGCGGCCTCA CCAAGGAGGC CTACCTCGAG TCGCAGGAGA AGACCGAGGA GGAGTTCGAC
GAGGAGCTGA CCACCGGCGC CCGCTCCGCG GTCAAGGCCG GGTTCATCCT CGACCAGCTG
GCCATCCAGG AGGACCTGAG CGCCGACCAG GGCGAGCTCA GCCAGTACGT CTTCGAGCAG
GCCCAGCGCA TGGGCGTGAG CCCGGACCAG CTGGCCCAGC ACCTGGTCGA GTCCAACCAG
ATCCGCGTCG CCTTCACCGA GGTCGTCCGC GGCAAGGCCA TGGACCTGGT CCTGGCCGGC
GCCCGGATCA CCGACGAGGA CGGCAACGTC GTCGAGCAGG AGACCGCCGA GGAGGAGGCC
GCCAAGGCCG CCGCCGTCGC CGCGGGTGAG GCCCTGGAGG CCGTCGAGGA CGACGCTGAG
GCCGACACCG CGGACGCGGC CGACGAGGCC AAGGCCGAGG AGACGAAGGC CGACGAGGCC
AAGTAG
 
Protein sequence
MKTDVEELSP TRVKLTIEVP FEELDHAFDV TYKSLAKQVR IKGFRPGKAP ARLIDRYVGR 
GAVISEAVNH AVPELYNEAI QKEELFALGQ PDVEVTKLED NDELAFTAEV DVRPKFEVED
YKGIEVTVDS AEVTDEQVDE QIGTLRERFS TLVGVDRPVE DGDHLSIDLS AAVDGEKLED
VAVSGYSYEV GTNTMLEGLD ETLRGMEAGG EATFSTTLVG GEHEGREADV TVTVHSVKVK
ELPELDDEFA QLASEFDTIE ELRADVRNRM GEVRRLQQLS AARDKALEQL IDSVDIPLPE
SVVEEEITRR RQSLEQQLAQ SGLTKEAYLE SQEKTEEEFD EELTTGARSA VKAGFILDQL
AIQEDLSADQ GELSQYVFEQ AQRMGVSPDQ LAQHLVESNQ IRVAFTEVVR GKAMDLVLAG
ARITDEDGNV VEQETAEEEA AKAAAVAAGE ALEAVEDDAE ADTADAADEA KAEETKADEA
K