| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_3355 |
|---|
| Symbol | |
|---|
| ID | 9247219 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 4009129 |
|---|
| End bp | 4010439 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003681267 |
|---|
| Protein GI | 297562293 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAGTGC ATTCACACCA GAAGGGGTAC ACAGTGCGCG CATGCGCTGC CGGGCTCGCC
GCACTGAGCC TCACCCTGGC CACCGCGTGC GGCGAACCCC CAGGGGAGGA GACCGCGGGG
GAGGGCGGCG AGACCGCGGG CCTGGCCGAG GACCCGGCGT TCGTCTGGGC GGTCACCGGG
GCCGACCGCG CGATCCACGA GGAGGTCGCG CGCCTGTGGA ACGAGAACAA CCCCGACCAG
CAGGTCGACA TCTTCTTCCT GGCCCCCACC GCCGACGAGC AGCGCCAGGC CATGTTCCAG
GACCTCCAGA ACCAGGCGGG GGAGTTCGAC GTCCTGGGCC TGGACGTCAT CTGGACCGGT
GAGTTCGCCG AGTACGGCTA CGTCGAGAGC CTGGAGGACC TGCGCGGCGA GGTCGAGGGC
GTCAGCCTGG AGGGCGCCGT CGACAGCTCC CAGTGGCAGC AGGAGCTGTT CGCGCTGCCC
TACTCCTCCA ACGGCGCGTT CCTCTACTAC CGCACCGACC TCGTCGAGGA GCCCCCCACG
ACCTGGGAGG AGCTCTACGA CACCGGCATG GCGGCCGCCG AGGAGGAGGG CATCTCCGCC
TACGTCGGCC AGGGCGACCA GTACGAGGGC TTCGTCGTCA ACTTCCTGGA GCTGTACTGG
TCCGCGGGCG GCCAGCTGTT CGACGACGCC CAGGAGCAGA GCACCTTCCT GGAGGGCGAC
GCCGCCACCA CGGCCCTGGA CTTCATGACC GAGGCCTACG AGAGCGGGTT CTACGCCGAC
GGCTTCGACA CCATGGTCGA GGACGACGCG CGCGCCCTGT TCCAGGCGGG CGAGGCCGTC
TACATGCGCA ACTGGCCCTA CGCCATCCCG CTCCTGGCGG GCGAGGGCGA CGAGGAGAGC
GCGGTCGCGG ACGACTTCGC GGTCGCCCCG CTGCCCACCT TCACCGGTGA GGGCACCACC
AGCGCGCTGG GCGGTCTCAA CAACGCGGTC AGCACGCTGA GCGACAGCAA GGAGCTGGCC
CGCGAGTTCG TCCTGTGGGC GGCCACCGAC CCCGAGGCGC AGGACATCCT GCTCCAGAAC
AGCCTGCCGC CGACCATGGC GAGCGCCTAC GAGAACACCG ACGACCCCGA CTTCCAGATG
CTCGGCGACA TCCTCGCCCA GGCCCAGGCC CGCCCGCCGG TGCCCGGCTA CAACTCGCTG
TCCCTGGCCG TGCAGGACAA CCTGCACCCG GCCTTCCGGG GCCAGGAGGA GTCCGGCACG
GCCCTGGAGG CGGTGGACCA GGCGGCCAAC GACGCGCTCG AACAAGAGTA G
|
|---|
| Protein sequence | MPVHSHQKGY TVRACAAGLA ALSLTLATAC GEPPGEETAG EGGETAGLAE DPAFVWAVTG
ADRAIHEEVA RLWNENNPDQ QVDIFFLAPT ADEQRQAMFQ DLQNQAGEFD VLGLDVIWTG
EFAEYGYVES LEDLRGEVEG VSLEGAVDSS QWQQELFALP YSSNGAFLYY RTDLVEEPPT
TWEELYDTGM AAAEEEGISA YVGQGDQYEG FVVNFLELYW SAGGQLFDDA QEQSTFLEGD
AATTALDFMT EAYESGFYAD GFDTMVEDDA RALFQAGEAV YMRNWPYAIP LLAGEGDEES
AVADDFAVAP LPTFTGEGTT SALGGLNNAV STLSDSKELA REFVLWAATD PEAQDILLQN
SLPPTMASAY ENTDDPDFQM LGDILAQAQA RPPVPGYNSL SLAVQDNLHP AFRGQEESGT
ALEAVDQAAN DALEQE
|
|---|
| |