Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_3263 |
Symbol | |
ID | 9247120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3896536 |
End bp | 3897120 |
Gene Length | 585 bp |
Protein Length | 194 aa |
Translation table | 11 |
GC content | 77% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003681175 |
Protein GI | 297562201 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.392887 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGGGCCA GACCCGCGGG CGAGCGGCGC ACGGCGCTCC TGGGCGCGGC GGCGCGGCTC TTCGCCGAGC ACGGTTACCG GGGGGTGTCC ATCGACGACC TCGGCCGCGC CGTCGGCACG ACAGGGCCCG CCCTGTACCG CCACTTCCGC GGCAAGCAGG CGCTGCTCGG CGCGGTGCTG GTGGACATCA GCGAACGCCT GGCGCGCCAG GGCGGCGAGC TGGTGGCGAG GGCGTCGGGC GCCGAGGAGG CGCTGGAGGC CCTGCTGCGC GGGCACATCG CCTTCGCCCT GGACGAGCCC GACCTGATCA CGGTGCACGA CCGGGAGCTG GGCAACCTCA CCGACGCCGA CCGGCGCCGG GTGCGCCGCC TCCAGCGCGG CTACGTCGAG CAGTGGGTGG GGGTGCTCGG CGAGCTGCGC CCCGACGCCT CGGCCACCGT CCTGCGCGCC GCCGTGCACG CCGTGTTCGG GCTCCTCAAC TCCACCCCGC ACAGCCGGGG CGAGCTGTCG CGGCGGCACA TGGCGCGGCT GCTGCTGGAG ATGGGCCGGG CCGCCCTGAC GGTCCCCGCC GCCGAGCCCG ACTGA
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Protein sequence | MGARPAGERR TALLGAAARL FAEHGYRGVS IDDLGRAVGT TGPALYRHFR GKQALLGAVL VDISERLARQ GGELVARASG AEEALEALLR GHIAFALDEP DLITVHDREL GNLTDADRRR VRRLQRGYVE QWVGVLGELR PDASATVLRA AVHAVFGLLN STPHSRGELS RRHMARLLLE MGRAALTVPA AEPD
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