Gene Ndas_3238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3238 
Symbol 
ID9247095 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3870844 
End bp3872442 
Gene Length1599 bp 
Protein Length532 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC transporter related protein 
Protein accessionYP_003681150 
Protein GI297562176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.083946 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAGCA CGCCATCGGG CGAGGGGGCC CTGGCGCCCC CCGCCGTTGA GCTGCGCGGG 
ATCACCAAGC GTTTTCCCGG CGTCGTGGCC AACCACGACA TCGACATCAC CGTGGCTCCC
GGTACCGTGC ACGCCATCGT CGGCGAGAAC GGTGCGGGCA AGTCCACGCT GATGAAGACC
CTGTACGGCA TGCACCGGCC GGACGAGGGA CACATCTACG TCCAGGGCCG AGAGGTGCGC
TTCGGCTCGC CCTCCGACGC CATCCGCAAC GGCATCGGCA TGGTGCACCA GCACTTCATG
CTCGCCGACA ACCTCACCGT GCTGGAGAAC GTGGTCCTGG GCGCCGAGCG CCGCCACGGC
ATCGGCAACC GCGCCCGCGC GCGCATCCGC GAGCTGTCCG CCCAGTACGG CCTGGGGGTC
GACCCCGACC GCCTCATGGA GGAACTGGGC GTGGGCGACC GCCAGCGCGT GGAGATCCTC
AAGGTCCTCT ACCGCGGCGC GCGGACCATC ATCCTCGACG AGCCCACCGC CGTCCTGGTC
CCGCAGGAGG TCGACGAGCT CTTCGACAAC CTGCGCGAGC TCAAGCGCGA GGGCCTGACC
GTCATCTTCA TCTCCCACAA GCTGGACGAG GTGCTCTCCG TCGCCGACGA GATCACCGTG
ATCCGCCGCG GCACCACCGT GGCCACCGCG GACCCGGGCA CCACCACCGC CCGGGACCTG
GCCACGCTCA TGGTCGGCGG CGAGCTGCCC GTGCCCGAGC TGCGCGAGTC CACCGTCACC
GACCACGTCG TGCTGTCCCT GGACGGGGTC ACCGTGCACT CCGCCGACGG CCGCGCCGTC
GTGGACGGGG TGAGCGTCGA CATCCGCCGG GGCGAGATCG TCGGCATCGC CGGTGTCGAG
GGCAACGGCC AGTCCGAGCT CATCGAGGCC ATCATGGGCA TGCGCCCGCT GGCCGCCGGG
AGCATCCGCC TGGAGGAGCA GGACATCACC GGCTGGCCCA CTCTCAGGAT CCGCGAGGCG
GGTGTGGGCT ACATCCCCGA GGACCGCCAC CGGCACGGCG TGCTGCTGGA GTCCCCCCTG
TGGGAGAACC GCATCCTCGG CCACCAGACC AAGGAGCCCA GCGTCCGCGG CCCCTGGATC
AACCGGACCG GCGCGCGTGC CGACTCCGAG CGCATCGTCG CCGAGTACGA CGTGCGCACC
CCGGGGATCG ACGTCATCGC CGACGCCCTG TCCGGCGGCA ACCAGCAGAA GTTCATCATC
GGTCGGGAGA TGAGCGGCTC CCCGCGCTTC CTGGTCGCCG CCCACCCCAC CCGGGGCGTG
GACGTGGGCG CCCAGGCCGC CATCTGGGAG CAGCTGCGCG ACGCCCGTGC CGCGGGCCTG
GCCGTGCTTC TGGTCTCCGC CGACCTGGAC GAGCTGATCG GCATGTCCGA CACCCTCCAC
GTCATCCTGC GCGGCCGACT GGTCGCGCAG GCCGACCCGA CCACCGTCAC ACCCGAACAG
CTGGGCTCGG CCATGACCGG CGCCGGACTG CACCGGGCCG ACCAGAGCAC GGAAGGCGAC
AGCGGTGCCG ACCGAAACGG AAGCGAGGGC GGCGCATGA
 
Protein sequence
MSSTPSGEGA LAPPAVELRG ITKRFPGVVA NHDIDITVAP GTVHAIVGEN GAGKSTLMKT 
LYGMHRPDEG HIYVQGREVR FGSPSDAIRN GIGMVHQHFM LADNLTVLEN VVLGAERRHG
IGNRARARIR ELSAQYGLGV DPDRLMEELG VGDRQRVEIL KVLYRGARTI ILDEPTAVLV
PQEVDELFDN LRELKREGLT VIFISHKLDE VLSVADEITV IRRGTTVATA DPGTTTARDL
ATLMVGGELP VPELRESTVT DHVVLSLDGV TVHSADGRAV VDGVSVDIRR GEIVGIAGVE
GNGQSELIEA IMGMRPLAAG SIRLEEQDIT GWPTLRIREA GVGYIPEDRH RHGVLLESPL
WENRILGHQT KEPSVRGPWI NRTGARADSE RIVAEYDVRT PGIDVIADAL SGGNQQKFII
GREMSGSPRF LVAAHPTRGV DVGAQAAIWE QLRDARAAGL AVLLVSADLD ELIGMSDTLH
VILRGRLVAQ ADPTTVTPEQ LGSAMTGAGL HRADQSTEGD SGADRNGSEG GA