Gene Ndas_3221 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_3221 
Symbol 
ID9247078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3850193 
End bp3852163 
Gene Length1971 bp 
Protein Length656 aa 
Translation table11 
GC content73% 
IMG OID 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_003681133 
Protein GI297562159 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGAAC AGGCGCTGAG AGTGGACGAG GCCGAGCTGC GCGGCCTCCT CGACGGCCGC 
TGGGCCCACG TGCGCGAACA CATGCGCGAC GCCCTGCGGG GAGACCTGTA CGCCCCCGTG
TACGGGCTGT CGATGGAGGA GCACCGCGCC CGCACGCTCG CCCAGCTCAA AGCCCTGGCC
AAGACCGACC TGCCCGCCTA CGGCTTCCCC GCCTCGGTGG GCGGACGCGA CGACGTCGGC
GCGTCCGTGG TCGGCTTCGA GATGCTGGTC AACGACCTGT CGCTCATGGT GAAGATGGGC
GTGCAGTGGG GGCTGTTCGG CGGGGCGATC AGCGCCCTGG GCACCGAGGC CCACCACGCC
GAGTACCTGC CCGGCGCGAT GTCGATGGAG CTGCCCGGCT GCTTCGCGAT GACCGAGACC
GGCCACGGCT CGGACGTGCA GGGCCTGCGC ACCACGGCCG TCTACGACCC CGACACCGAG
GAGTTCGTGG TCCACACCCC CGACGAGGCG GCGCGCAAGG ACTACATCGG CAACGCGGCC
CGCGACGGCC GCCTGGCGGT GGTGTTCGCC CAGCTGAGCA CCGGTGGCGA GGAGCACGGC
GTGCACGCCC TGGTGGTCCC GATCCGGGAC GGGCGGGGCA GGCCGATGCC GGGCGTGCGC
ATCGGCGACT GCGGCCCCAA GGCCGGACTC AACGGCGTGG ACAACGGACG GCTGGAGTTC
GACCACGTGC GGGTGCCGCG CACCAACCTG CTCAACCGGT ACGGGGACGT GGCCGCCGAC
GGCACCTACT CCAGCCCCAT CGAGAGCAAG GGCCGACGCT TCTTCACCAT GCTCGGAACC
CTGGTCCGGG GCCGGATCAG CGTGGCGGGC GGCGCGGGGA GCGCGGCCAA GGCCGCGCTG
ACCATCGCGG TGCGCTACGG CGACACCCGC CGCCAGTTCA CCCGGCCCGA CGGCGAGGGG
CGGCCCGAGC GGGAGGTGCG CGTCCTGGAC TACCTGGCGC ACCAGCGCAA GCTGCTGCCC
GCCCTGGCCC GCACCTACGC GCTGCACTTC GCGCAGGAGG AGCTGGTCAC CCGGCTGCAC
GAGCTGTCCC GCTCCCCCGA GCGCGACGAG CACGCCCAGC GCGAACTGGA GTCGCGGGCG
GCCGGGCTCA AGGCGGTGGC CACCTGGCAC GCCAGCCAGA CCATCCAGAC CTGCCGGGAG
GCGTGCGGCG GCGCCGGGTA CCTGTCCGAG AACCGGATCC CTCAGCTCAA GGCCGACTCC
GACATCTTCA CCACGTTCGA GGGCGACAAC ACGGTCCTGC TCCAGCAGCT CACCAAGGGC
CTGCTGACCA ACTTCAAGGA CTCGTTCGGC GACCTGGACC AGCTGGGGCT GGCCCGGTTC
ATGGCGGGCA AGGTCTTCGA GACGGTCATC GAGCGCACCG CCGCGATCCC GCTGATCGAG
CGGCTCGTCG CGGCCGCCCC GGGGCGCGGC GAGGAGGCCA GCCTGTACAA CCGGGGTTGG
CAGCTGGAGC TGCTGGAGGA CCGCGAGAAG CACGTCATCG AGGGCCTGGC CGCGCGGCTG
CGCAGGTCCG GCAGGAACGG CGAGGACGCC TTCGACGTGT TCAACCGCGC CCAGGACCAC
GTGCTCGCCG CGGGCCGCGC GCACATGGAC CGGGTGGTGC TGGAGGCGTT CGTGGCGGGG
ATCGACCGCT GCGGGGACAC CGCGACCGCC AAGCTGCTCA ACCGGCTGTG CGACCTGTAC
GTGATGTCGG TGGTCGAGGA GGACCGCGCG TGGTTCCTGG AGCACGAGCG GCTCTCCACC
TCGCGGGCCA AGGCGGTCAC CCAGGCGGTC AACGACCTGT GCCGGGGCCT GCGCCCCTAC
GCCGTGCAGC TGGTGAACGC GTTCGGCCTG CGCGACGAGT GGCTGGCCGC GCCGATCGCG
CTGGGCGGCG AGCACGCCCG CCAGGGCGAC CCGGTCCCCG GGCGCGGCTG A
 
Protein sequence
MNEQALRVDE AELRGLLDGR WAHVREHMRD ALRGDLYAPV YGLSMEEHRA RTLAQLKALA 
KTDLPAYGFP ASVGGRDDVG ASVVGFEMLV NDLSLMVKMG VQWGLFGGAI SALGTEAHHA
EYLPGAMSME LPGCFAMTET GHGSDVQGLR TTAVYDPDTE EFVVHTPDEA ARKDYIGNAA
RDGRLAVVFA QLSTGGEEHG VHALVVPIRD GRGRPMPGVR IGDCGPKAGL NGVDNGRLEF
DHVRVPRTNL LNRYGDVAAD GTYSSPIESK GRRFFTMLGT LVRGRISVAG GAGSAAKAAL
TIAVRYGDTR RQFTRPDGEG RPEREVRVLD YLAHQRKLLP ALARTYALHF AQEELVTRLH
ELSRSPERDE HAQRELESRA AGLKAVATWH ASQTIQTCRE ACGGAGYLSE NRIPQLKADS
DIFTTFEGDN TVLLQQLTKG LLTNFKDSFG DLDQLGLARF MAGKVFETVI ERTAAIPLIE
RLVAAAPGRG EEASLYNRGW QLELLEDREK HVIEGLAARL RRSGRNGEDA FDVFNRAQDH
VLAAGRAHMD RVVLEAFVAG IDRCGDTATA KLLNRLCDLY VMSVVEEDRA WFLEHERLST
SRAKAVTQAV NDLCRGLRPY AVQLVNAFGL RDEWLAAPIA LGGEHARQGD PVPGRG