Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2948 |
Symbol | |
ID | 9246801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 3522546 |
End bp | 3523808 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | putative transcriptional regulator, PucR family |
Protein accession | YP_003680864 |
Protein GI | 297561890 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0167209 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAACACCG AACCCCACCA GACCCCGGAC GACCAGGGCA CCGCGGCGGA CCCGGAGGGC GCACCCGCCT CCGTGCCCAC GGAGCAGGAA CGCGTGCGCG CGGAGACCGT GCGCCGCCTG GAGCGCTCCA TGGGCGCGCT CGGCACGGCC GCCGTGGCCC GCATGGAACA GCGCCTGGGC TGGTTCCGCC GGATGTCGGC CGAGGACCGC TCGTGGATCG GACTGGTCGC CCAGTCCGGG GTGGCCGCCT TCGTCGACTG GTTCCGCAAC CCGGTGCGCG GCCGCCCGGC CATCACCGTC GAGGTCTTCG GCACCGCGCC GCGCGAGCTC ACGCGCTCGG TCTCCCTCCA GCAGACCGTC GACATGATCC GCGTGGTCAT CGACGTGGTC GAGGGACAGG TGGAGGAGCT GGCCGCCCCC GGCGGAGCCC AGCAGCTGCG CGAGGCCGTG CTGCGCTACA CGCGCGAGGT GGCCTTCAGC TCCGCGAAGG TCTACGCGCG CGCCGCCGAG GCGCGTGGCG CGTGGGACGC GCGCCTGGAG GCCCTGATCG TGGACGCCCT GCTGCACGGC GACCAGGAGG ACGGCCTCCA GACGTGGGGT TCGGCGCTGA GCTGGTCGCA CACCCCGGTC GTCGCGGTGG CCGGGGAGGT CGGCGACGAC GACGGCGGCA AGGTCCTGGA CGACCTGCGC TCGGCCGCGC GCCGCCTCGG CCACGACGTG CTGGCCGGGA TGCAGGGACG TCGCGTGGTC GTGGTGATCG GCGTGGGGGA CCGCTACCCG GCGCAGGACC TGCCCGCGGC CGCCGCCGAA CCGCTGGCCG GGCTCTTCGG CTCGGGCCCG GTGGTGGTGG GGCCCGCCGT CCCCGACCTG CGGTCCGCGG GGGCCTCGCT GCGCGCCGCG GTCAACGGAC TGCGAGCCGC GGTGGCCTGG CCGGACGCGC CGCGCCCGGT CCTCGCCGAC GACCTGCTGC CCGAGCGCGC GCTCCAGGGC GAGGCCGAGG CGCGCAGGCA GCTGGTCGAG GAGGTGTACG TGCCCCTGCT GGGCGCGGGG TCGCCCCTGC TGGACACCCT GTCGGTGTAC CTGGAGCACG CCTCGTCGCT GGAGGCCACC GCGCGGATGC TGTTCGTGCA CCCCAACACG GTCCGCTACC GGCTCAGCCG GATCGCCGAG CTCACCGGGC GCACGCCCTC CGACGGGCGC GGCTCCTTCG TCCTGCGGGT GGCGGTCGCC CTCGGGCGGC TCGCGCGGAC CGACGGCGCC TGA
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Protein sequence | MNTEPHQTPD DQGTAADPEG APASVPTEQE RVRAETVRRL ERSMGALGTA AVARMEQRLG WFRRMSAEDR SWIGLVAQSG VAAFVDWFRN PVRGRPAITV EVFGTAPREL TRSVSLQQTV DMIRVVIDVV EGQVEELAAP GGAQQLREAV LRYTREVAFS SAKVYARAAE ARGAWDARLE ALIVDALLHG DQEDGLQTWG SALSWSHTPV VAVAGEVGDD DGGKVLDDLR SAARRLGHDV LAGMQGRRVV VVIGVGDRYP AQDLPAAAAE PLAGLFGSGP VVVGPAVPDL RSAGASLRAA VNGLRAAVAW PDAPRPVLAD DLLPERALQG EAEARRQLVE EVYVPLLGAG SPLLDTLSVY LEHASSLEAT ARMLFVHPNT VRYRLSRIAE LTGRTPSDGR GSFVLRVAVA LGRLARTDGA
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