| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2853 |
|---|
| Symbol | |
|---|
| ID | 9246704 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 3405985 |
|---|
| End bp | 3406791 |
|---|
| Gene Length | 807 bp |
|---|
| Protein Length | 268 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | |
|---|
| Product | ABC-type xylose transport system periplasmic component |
|---|
| Protein accession | YP_003680770 |
|---|
| Protein GI | 297561796 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.325203 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAACGCAC GACGCTTCAC ACCGCGGCAC ACGACTGCCG GCTTCGCCGC CGCGGGAGCC
GCTCTCGCCC TCCTCGTCTC CGGTTGTGGC TCGCTCACGA CCACCGGCGG CGAGGCCGAG
CAGGAGACCC ACACCGTGGA GGAGGGCTTC CACGTCGGAC TGCTCCTGCC CGACCTGCAC
ACGGCCCGCT ACGAGGCCTT CGACCGCCCC TTCTTCGAGG AGGCGATGGG CGAACTGTGC
CCCAACTGCG AGATCTCCTA CGCCAACGCG GACCAGTCCG TGAGTGAGCA GCAGACCCAG
GCCCAGGCCA TGCTGACCGA CGGTGTGGAC GTGCTGGTCC TGGACCCGGT GGACGCCGCC
GCCGCGGCCG GGACGGTCAA CGAGGCCAAG TCCCAGGGCG TGCCCGTGAT CGCCTACGAC
CGCCTCGCCG AGGGCGGCGC GGACATGTAC GTCTCCTTCG ACAACAACCG CGTCGGCCAG
GTCCAGGCCG AGTCGCTGCT GGAGGCCCTG GAGGAGGAGG GCAGCACCGG TGACGGCTCG
ATCGTGGTCA TGCACGGCTC GCCCACCGAC CCCAACGCCG CCATGGCCGT CGGCCTGGCC
ACCGGCGAGG ACCCCGAGCT GGGCGAGCAC ACGCTCACCG AGGTCGAGGA CGGAGGCGGC
GAGACCGTCC CCGCCGTCCT GCTGGAGCCG ATCGCGGTCA CCGCGGAGAA CGTCGGCGAC
ACGGTCGTCT CGGACGGGAT CTACAGCATC GAGGAGATCT GCACCGACGA CTACGCCGAC
ACGGACTTCT GCCAGGAAGC CCTGTAG
|
|---|
| Protein sequence | MNARRFTPRH TTAGFAAAGA ALALLVSGCG SLTTTGGEAE QETHTVEEGF HVGLLLPDLH
TARYEAFDRP FFEEAMGELC PNCEISYANA DQSVSEQQTQ AQAMLTDGVD VLVLDPVDAA
AAAGTVNEAK SQGVPVIAYD RLAEGGADMY VSFDNNRVGQ VQAESLLEAL EEEGSTGDGS
IVVMHGSPTD PNAAMAVGLA TGEDPELGEH TLTEVEDGGG ETVPAVLLEP IAVTAENVGD
TVVSDGIYSI EEICTDDYAD TDFCQEAL
|
|---|
| |