Gene Ndas_2728 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2728 
Symbol 
ID9246579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3260694 
End bp3264638 
Gene Length3945 bp 
Protein Length1314 aa 
Translation table11 
GC content73% 
IMG OID 
Producthelicase domain protein 
Protein accessionYP_003680647 
Protein GI297561673 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTGAGT CCAATGGCGC CCTCTTCGAC CACCCCCACG GCGAGCAGAC CGCCCTCGAC 
ACCTCCACCA CCCCCGCCAA GGAATCCGGC TCTCCCACCG CCAAACCGCC CACCAAGGCC
GAACTCCGCG CCGCCCAGAA CGCCGCCCGC GACGCCGAGC TGATCGCCTC GCTCGACCGC
CCCCAGGAGT TCACCGAGGC CACCTCCTTC GAGGTGCGCG ACGAACTCCA GCACTTCCTG
GAGCGCGACC TCCTCGGCCC CTGGGACGGC CCCACCGAGG AACTCCCCAC CCGCTACTCC
GGCCCCCGCG AGCGCTACCT CGTCGGGGCG CTCGGCCCGC GTCACCAGAC GCCCCTCTCC
TCCCGGGACT CCGCCGACCA ACTCCCGGAC TCCGACGCCG AGGCGGACGG CGCCGCCTCC
GGCGAGGGCT CCGGCGAGCT GCCTGAGAAG GCCACCACCC AGAACCTGGG TCACCTGTGG
GCCTCCACCA TGGGCCTGTC CTTCTCTGTG CCCGCCGACA CCACCGCAGT TCACGTCCGC
GCCGTCTGGG GCCAGTACGG CCGCGAGAGC GTGGAGGAGG ACGAGGGCAG GAAGCGCAGC
GTGTGGGTGC GCGAGCCCAA GGAGTTCGAG CGGGAGATCC GCCTCGACGG CAAGCCCGAC
TTCAAGGTCG GGCTGACCGA CCCCGACCCG GACTCCCCCT GCGTCTACCT GGCCGTGTCC
GTGCGCGAGG ACCGCGACGG CCTCCCCCGC CGCACGGTCG AGCTGAACCT GGTCAACAAC
CGCCTCCCCG TCCACCCCAA CGGCGACACC ATGTGGCTGT TCCAGGCCCA ACTGTCGGTC
ACCGCCCTGG ACGGCTCCTC CCCCGTCTTC CTCCCCGTGG ACGACCCGCT CGACGGCGGC
GTCCCCGCCT CCGACGACCC CGAGGAGCTG CACCTGCGGC TGCTCTACCG CGACCTGCTC
AAGTACGCCG ACGGGCGCAA CATCGCCGTG GAAGCCGAGG TGGCCGAGGG AGCGCGCCGG
GCGCACCGGC TGACCACCAC CTGGCTGCCC CACCACGACG TGCCCGCCAC CACGGCGGCC
GTGGGCGCGG GTTCGGCGCT GGCCTCGGCG CAGCTGTCCA TGGACGTGCT GGCCTCGCCC
GAGACCGGCA CCGACGCCCT GCGCGCGGGC CTGCTGCCGC TGGCCGACGG CTACTCCGCC
TGGCTGGACG GGCGCGAGGC GGCCGCCGCC GAACTTCCCG AGGCGCTGCG CGAGACCGCC
GAGACGGCCG TGTTCCGGGC CCGGCGGGCC GCCGAGCGTA TCCGTGCGGG GATCGACCTG
CTCACCGACC CGACCCACCC CCGGCACGGG GAGGCGTTGA GGGCGTTCCG GTTCGCCAAC
CGGGCCATGG CCGACCAGCG CCGCCACAGC GAGATCTCCC GGCTGCGCGA GGACCCCGAG
GTCTCCTACG CCCAGGCGCG GGAGGCCGTG AACGCGCGCG GCGTCTCCGC CGCGTCCTGG
CGCCCCTTCC AGCTGGCGTT CGTGCTGCTG AACCTGCCCG CGATCACCGA CCCCGACCAC
GACGAGCGGG CCGCCTCCGC CGAGGCCACG GTGGACCTGC TGTTCTTCCC CACCGGTGGC
GGCAAGACCG AGGCCTACCT GGGGCTGACC GCCTTCACCT TCGCCATCCG GCGCCTCCAG
GGCGTGGTGG GCTCGGGTGC GGACGCCCGC GACGGCGGCG ACGGGGTGGC GGTGCTGATG
CGCTACACCC TGCGCCTGCT CACCGCCCAG CAGTTCCAAC GGGCCGCCGC CCTGGTGTGC
GCGGCCGAGG TGCAGCGCGC CGAGGACCCC GCGACGTGGG GCGAGCGCCC CTTCCGGATC
GGGCTGTGGG TGGGCGGCGG CGTCTCGCCC AACTGGTTCG ACGAGGCGGA GAAGCAGATC
GCCGAGGCCC GCGAGCGGGG CCGGGGCGAG CGCGCCAACG TGTTGCAGAC CCTGTCGTGC
CCGTGGTGCG GCACCAAGCT CCAGGCCCAC CGGGACCTGG ACCCCCGGCA CGAGGTGCGA
CGGGTGCTGC TGTTCTGCGC CAACGGCGAG GGGGCGGACG CCTGCCCGTT CTCCCAGCGC
AACAGCGCGG AGGGGCTGCC GATCCTCACG GTGGACGAGG AGATCTACCG CTACACGCCC
AGCCTGCTCA TCGCCACCGT GGACAAGCTC GCGCAGCTGC CCTGGCGGGG GTTCGCCGGG
ATGCTGTTCG GCCGGGTCGC GGAGTACTGC CCGCGCCACG GGTACCGCCA CCCGGACCTG
AACGAGAAGA CGGGCTGCCG CGGCCGCCAC AACGCCAAGG GCCCCCTGCC CAAGGTGGAG
AGCGTGCCCG TGCGGCGGCT GCGCCCGCCG GACCTGGTCA TCCAGGACGA GCTGCACCTG
ATCTCGGGTG CGCTGGGCAC CACCGTGGGC CTGTTCGAGG CGGCGGTGGA CGAGCTGACC
TCGTGGACCA CCCCGTCGGG CAGGCGGACC TCGCCCAAGA TCGTGGCCTC CACCGCCACC
ACCAAGCGCG CCGGGGACCA GGTGCGCGGG GTGTTCGGGC GGGGCCTGGA GGTGTTCCCG
CCGCAGGTGA CGGAGGTGTC CGACACCTTC TTCTCCACCC AGGTGGAGGT CACCCCCGCC
GCCCCGGGGC GGCGCTACAT GGGCGTGTGC GCGCACGGGG TGCGGCTCAA GGCCGCCGAG
ATCCGCCTGG CGGAGATCCT CGCGCTGACC GGCCAGCACC TGTTCGACAC CTACGGCGCC
CCGGCCGACC CGTACATGAC CACGGTCGGC TACTTCAACG CCACCCGCGA ACTGGCGGGC
ATGCGGCGGC ACATGGACGA CGACGTCACG GTGCGCGCCC GCAGGCACGG GCGCGAGCGC
GGGATGGCCA ACCGGCTGAC CCGGTTCGGA CGCACGTCGA TGTTCAACGT CCAGGAGCTG
ACCTCGCGCA TCTCCTCGGC CGACATCAGC GACGTGCTCA AGCGCCTGGA GATCGGCTTC
GACCCCGAGC TGGACACCAG CGAGCGCAAG CGGGCCGTCA CGGCCGCCTT CATGGAGGCC
AGGAGGGCGT GGGAGTCGCG CTCCTCGGCC GCCCGCCAGG TGGAGCCCCA CCCGCTGGTG
CGGCGCGAGG GCGAGCGGCA CCGCGAGACC CGGGACCCGG TGGACACCGT GCTGGCCACC
TCGATGCTCC AGGTGGGCGT GGACGTGTCG CGGTTCGGGC TGATGGTGAT GACCGGCCAG
CCCAAGAACA CCGCCGAGTA CATCCAGGCC ACCTCGCGCG TGGGCCGCGA CGCGGCCCGG
CCGGGCCTGG TGGTGACCCT GTACAACTGG ACGCGCCCGC GCGACCTGGG GCACTACGAG
GACTTCGGGT ACTACCACGC GACCTTCTAC CGGCAGGTGG AGGCGCTCAG CGTCACCCCG
TTCACGCGCC GGGCCCTGGA CCGGGGCACA GCGGCGATGT TCGTGGCGGC GGTGCGCCAC
GCCCGGGAGG ACTTCTCCCG CAACGGCGAC GCCCACGACG TGGACCTGGA CGGGCCCGCG
GTGGAGGAGG TCGCCGCGCG GATGCTGGCC CGGGCCGAGT TCGTGGCGGG CGAGAGGGGC
CGCGACTACC TGGCCGAGCG GATCAACAGC CTGCGCGACC ACTGGAAGCA GGCCCGCGAG
GGCTCCACCC GGCTGGGCTA CGAGCGCTCC ACCCGGGAGC GCCAGCAGCT GCGCGGGCTG
CTGACCAAGC CGGGCGAGGG CTCCTGGAGC GAGACCACCG TCGGCATGTC CATGCGTGAG
ACCGAGAACG AGATCAACCT GCTGGTGTCC GGCAGCGGCG ACTTCTTCCG ACCGGTGCTC
AACGAACCGC CGTGGTCGTT CGCGCCGCCG AGCGCGCGCG GCGACGAGGG CACCGAGGAC
GAGCGGACCC CGGCCCCGGC CGGACAGGCG AAGGAGCAGG GCTGA
 
Protein sequence
MSESNGALFD HPHGEQTALD TSTTPAKESG SPTAKPPTKA ELRAAQNAAR DAELIASLDR 
PQEFTEATSF EVRDELQHFL ERDLLGPWDG PTEELPTRYS GPRERYLVGA LGPRHQTPLS
SRDSADQLPD SDAEADGAAS GEGSGELPEK ATTQNLGHLW ASTMGLSFSV PADTTAVHVR
AVWGQYGRES VEEDEGRKRS VWVREPKEFE REIRLDGKPD FKVGLTDPDP DSPCVYLAVS
VREDRDGLPR RTVELNLVNN RLPVHPNGDT MWLFQAQLSV TALDGSSPVF LPVDDPLDGG
VPASDDPEEL HLRLLYRDLL KYADGRNIAV EAEVAEGARR AHRLTTTWLP HHDVPATTAA
VGAGSALASA QLSMDVLASP ETGTDALRAG LLPLADGYSA WLDGREAAAA ELPEALRETA
ETAVFRARRA AERIRAGIDL LTDPTHPRHG EALRAFRFAN RAMADQRRHS EISRLREDPE
VSYAQAREAV NARGVSAASW RPFQLAFVLL NLPAITDPDH DERAASAEAT VDLLFFPTGG
GKTEAYLGLT AFTFAIRRLQ GVVGSGADAR DGGDGVAVLM RYTLRLLTAQ QFQRAAALVC
AAEVQRAEDP ATWGERPFRI GLWVGGGVSP NWFDEAEKQI AEARERGRGE RANVLQTLSC
PWCGTKLQAH RDLDPRHEVR RVLLFCANGE GADACPFSQR NSAEGLPILT VDEEIYRYTP
SLLIATVDKL AQLPWRGFAG MLFGRVAEYC PRHGYRHPDL NEKTGCRGRH NAKGPLPKVE
SVPVRRLRPP DLVIQDELHL ISGALGTTVG LFEAAVDELT SWTTPSGRRT SPKIVASTAT
TKRAGDQVRG VFGRGLEVFP PQVTEVSDTF FSTQVEVTPA APGRRYMGVC AHGVRLKAAE
IRLAEILALT GQHLFDTYGA PADPYMTTVG YFNATRELAG MRRHMDDDVT VRARRHGRER
GMANRLTRFG RTSMFNVQEL TSRISSADIS DVLKRLEIGF DPELDTSERK RAVTAAFMEA
RRAWESRSSA ARQVEPHPLV RREGERHRET RDPVDTVLAT SMLQVGVDVS RFGLMVMTGQ
PKNTAEYIQA TSRVGRDAAR PGLVVTLYNW TRPRDLGHYE DFGYYHATFY RQVEALSVTP
FTRRALDRGT AAMFVAAVRH AREDFSRNGD AHDVDLDGPA VEEVAARMLA RAEFVAGERG
RDYLAERINS LRDHWKQARE GSTRLGYERS TRERQQLRGL LTKPGEGSWS ETTVGMSMRE
TENEINLLVS GSGDFFRPVL NEPPWSFAPP SARGDEGTED ERTPAPAGQA KEQG