Gene Ndas_2727 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2727 
Symbol 
ID9246578 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3256610 
End bp3260701 
Gene Length4092 bp 
Protein Length1363 aa 
Translation table11 
GC content63% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003680646 
Protein GI297561672 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0332974 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.249624 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAACC CCCGATCCCG CGGCAAGCAC TCCCCCGCCG ACGCCGTCCG CCAGCAGCAC 
CTGGACTGGC TGGGCCTGGT GGAGGTCAGC GGCCCCTTCC TGACCCTGCC GGTGCTGCGC
GAGGTCTGGT CCGCCGGACT GGATTCGCTG GAACCCGAGC AGATGCGGGA GCTGCGCCGG
ACCTCCGCGC TCTGGCGCGA CCAGACCGGG CCGGGCGGCG GGGACCGCGA GGCCGGGCGG
GACGCCTGGG TGCGGTACGT GCTCGGTGAC CTGCTGGACT GGCGCGAGAC CCTGCGCACC
GACGGGCTGG AGCCGCTGGC GATGGAGGTG GCCGAGCACG ACACCGCCGT GGCGCCCTCG
TTCGTGCTCA CCCACCCCGA CGCCGAGCCG GAGGGCGAGG TCAAGGCGGA CGACGTCCGG
CTGCTGGGAC TGACCTGCCC GGTGGACCAG TCCCCGGTGC AGCGTGTGAA GGACGACTCC
TGGTCGGCCA CCCCGGCCGA CCGGCTGGCG CAGCTGTGCC GCCACCACGG TGTGGAGCTG
GGCCTGGCCA CCAACGGGCG CTGGTGGGTG CTGGTGTGGG CGCCGCGCGG CGGGGTCACC
ACCACCGCGC TGTTCGACGC CTCGCTGTGG ACGGACGCCG CCGAGCGCGA CGTGCTGCGC
GCGTTCTACT CCCTGCTCAA CCGGCGGCGG TTCTTCACCG TGCCCGACGA GCAGCAGCTG
GTCCCGCTGC TCAACCGGAG CCTGGGCTCG CAGGAGGACG TCACCGAGGC GCTGGGCGTG
CAGGTGCGCC AGGCCGTGGA ACTGCTGGTC GCCGCGATCG GCCGGGCCGA CACACGGGCG
CGCGAGCGCG GCGAGCGGGA CCTGAGCGCC GTGTCCGCGC ACGATGTGTA CCGGGGCGCG
GTGTCGGTGA TGATGCGGAC GGTGTTCCTG CTCTTCGCCG AGGAGCGCGG CCTGCTGCCC
TCCGACAACG ACCTGTACGC GGGTTCGTAC TCGGCCGGTG GGCTCTACGA GGAGCTGGAG
GCGCTGGCCC GGGAGGGCAC CGAGGACGAC CTGGAGCGGA CCACCGCGGC CTGGCACCGG
CTGCTGGCGC TGTTCCACGC GGTCTACCAC GGTGTGGACC ACCCCAAGCT GAGGATGCAC
GCCCTGGACG GGTCGCTGTT CAACCCCGAG ACGTTCCCGT GGCTGCCGCT GGACATCGAT
GACCGGACCG TGCTGCACAT GCTCAAGGCG GTGCAGTACG TCAAGGTGGG GCGCGGGAAG
TCGGCGGAGC TGAGGAAGCT GTCCTTCCGC GCCCTGGACG TGGAGCAGAT CGGTTACGTG
TACGAGGGTC TGCTGGCCTT CGACGGGTTC CGCGCCGAGG ACCTCGTGGT GGGGCTGGTC
GGCAAGGAGG GGTTGGAGGC GGAGGTCCAG CTCCGCGACC TGGAGGCGTT GGCCGCCCGG
CACACGGACG TGGAGGAGCT GGCGGAGGAG CTGGCCGCCG AGTACAAGGA CTCCGGGATC
GGCTCGGCCA GGAAGCTGGC CAAGGCGCTG GCCCCGCTGT CCAAGGAGGA GCGGACCGAG
GCCGTCAAGC AACTGCGCGG TGTGGTGCCC GGCGACGAGC CGCTGGTGGA GAGGCTGCTG
CCCTTCTTCC GGATTCTCCG TAACGACCTG CGCGGACTGC CCATGGTGGT GCGGGGCGGG
GAGCTGTACG TCACCGAGTC GGCGCTGCGG AAGAACACGG GGACGCACTA CACGCCTAGG
GAATTGGCTG AAAAGGTAGT GTTCAACGCC CTGGAACCTC TAGTTTACGC TCCGGGACCA
CTCCAAACGG CGGACACCAG TAAGTGGAAA CTCAAAAACA GCCACGAGAT CCTGGCGCTG
AAGGTCGCCG ACATCGCGAT GGGTTCGGCG GCGTTCCTGG TTGCGGCAGC CCGTTACCTG
GGTGACCGCC TTATCGAAGC TTGGGCAAAG GAGAAAGACC CGCACGCCGA GGGCTACACG
CCGCAGGAGA ATGATGTGCG TTCTGACGAC GACAAGGTCG TCATCGAGGC CCGTCGTCAG
GTGATTGAGC ACTGCCTTTA CGGCGTAGAC ATCAACCCGA TGGCCGTGGA GATGGCCAAG
CTGTCGCTGT GGCTGGTGTC GATGGACCCG AAAAGGCCGT TCACGTTCCT GGACGACCGG
TTGGCTTCGG GTGACTCACT GCTCGGGATC ACGTCGCTTG AGCAACTTGA GTACATGCAC
ATGGACCCGA AGCAGGGCCG AAAGATTCAC GAGCGCGGCC TAGTGGACTT CACCAGGGGC
GTGCGTGTCC TAATCGGCCG GGCTGCGGAA TCCCGGAGAA AACTTTCCAA AATGGACGGC
GCCACGATGG ACGGGGTGAA CCGGAAGCGG TCGGTCCTCG GCGAAACCGA ATTGGAGACT
GGCCAAGCAC GACTACTCGC CGACCTGGTG GTGGGCGCTG CGCTTTCCAG TGTGGGCAAG
AGTGAAGCCA TCGCGCGGGA CCAAGCATTG AAAGCGGCCG ACCTGGCACG ACGCCTGAAC
ACTGCCGAAC CTGAGGCTCG AATCACAGCG AAAAAGTGGC TGGACACTGA CCGCCCGAAT
GGAGCTTTCG AACGCAAGCC TCTACACTGG CCTTTGGCAT TCCCCGAGGT CTTTGAAAAC
GGTGGCTTCG ATGCCGTAAT CGGCAACCCT CCGTTCCTCG GCGGACCAAA GATCCGTCCA
ACACTCGGAG GGCAATATCG CGAATTAATT ACAGAGGTAA TTGCCAAGGG AACGCGAGCA
ACAAACACAG ACCTCGTCGC CTATTTCGCA CTACAAGCCC ACCGAGTCGT CAACAAGGAA
GGACAGGCAG GAATAATTGC AACAAACACT CTCACCCAAG GAGCAACGCG ACGAGTCGGA
CTCGATCAGA TAATCGAATC TGGAGTTCTT ATCAGAGGAG CCATTAAAAG CGAGTCGTGG
CCTTCGCGTT CCGCAGCACT CGAATACTGT GTCGCATGGA CTACTAAAAA GTCACTCGAA
AAAGACTCAA TCGTTCTGGC CGACGGCGTG GCCACTGCGA CCATTACTGC CACCCTTGAC
GCGAGTACTT CAAAGAAGAA GCCAGCTCAC AAACTCGCCA AAAACGCCAA AGTTTCATTC
CTTGGACACC ATGTCAACGG AAAGGGTTTC ATCCTCACTC CCCAAGAAGC AAGCTACCTT
CTATCGACAG AGGACAACAA TTCAGAGGTC GTCTTCCCGT ACCTAATCGG TCAAGATATC
GCAGACTCTC CGACATCGTC TCCTTCGCGA TGGATAATTA ATTTCCACGA CTGGAGTGAA
GAAAAATCCA AAAAATACAA AGATCCTTTT CAAAAGGTGG ATTCACTCGT AAAGCCAGAG
CGACTAAAGA GAAATAGAGA GTCGCATCGA AAATACTGGT GGAGGTATGC CGATTATCGA
CGAGGCCTCG AATCCTCTAT TTCGAGCCTT GATCGGATTA TTGCCTTCGC ACGGGTGAGC
AAAACTACTG CTCCCGTCAT GGTGCCAACA GGGCAGGTTT TCAGCGAGCA AATCGTAGTG
CTCGCTAGTG ATGACACGGC CATGCTGGCG CTACTTTCAA GCACTTCCCA TTATTGGTGG
GCTATCACAC GTGCCTCCAC ACTGGAGACT CGAATTCGCT ACACACCCTC GGATGTGTTC
GAGACCTTTG CGATGCCGGA GCTCACCCAA GAACTCCGGG ACCTCGGCGA CCGTCTCGAC
ACCTACCGCC GCGACGTGAT GCTTTCCCGC AACACCGGGC TCACGAAGAC CTACAACCTG
GTCTTCGACC CGGCCTGCAA CGACTCCGAC ATCGTCGAAC TCCGCGCCAT CCACCGCGCC
ATCGACGAGG CCACCATCCG TGCCTACGGC TGGGAGGACC GCATCGAAGC CGTCAGTGGA
CTCGACCACG GCTTCCACAA GGTCGGCCGC GAGACCCGCT ACACCATCGG CCCGGCCGCA
CAGCGCGAAG TCCTGGACAG CCTTCTAGAA CTGAACCACG AGCGCTACGC CGAAGAGGTC
GCTCAGGGCC TGCACGACAA GAAGGGCAAG CGCAAGTCCG CTGCCCAGGA AGGGACGCTG
TTCGATGTCT GA
 
Protein sequence
MSNPRSRGKH SPADAVRQQH LDWLGLVEVS GPFLTLPVLR EVWSAGLDSL EPEQMRELRR 
TSALWRDQTG PGGGDREAGR DAWVRYVLGD LLDWRETLRT DGLEPLAMEV AEHDTAVAPS
FVLTHPDAEP EGEVKADDVR LLGLTCPVDQ SPVQRVKDDS WSATPADRLA QLCRHHGVEL
GLATNGRWWV LVWAPRGGVT TTALFDASLW TDAAERDVLR AFYSLLNRRR FFTVPDEQQL
VPLLNRSLGS QEDVTEALGV QVRQAVELLV AAIGRADTRA RERGERDLSA VSAHDVYRGA
VSVMMRTVFL LFAEERGLLP SDNDLYAGSY SAGGLYEELE ALAREGTEDD LERTTAAWHR
LLALFHAVYH GVDHPKLRMH ALDGSLFNPE TFPWLPLDID DRTVLHMLKA VQYVKVGRGK
SAELRKLSFR ALDVEQIGYV YEGLLAFDGF RAEDLVVGLV GKEGLEAEVQ LRDLEALAAR
HTDVEELAEE LAAEYKDSGI GSARKLAKAL APLSKEERTE AVKQLRGVVP GDEPLVERLL
PFFRILRNDL RGLPMVVRGG ELYVTESALR KNTGTHYTPR ELAEKVVFNA LEPLVYAPGP
LQTADTSKWK LKNSHEILAL KVADIAMGSA AFLVAAARYL GDRLIEAWAK EKDPHAEGYT
PQENDVRSDD DKVVIEARRQ VIEHCLYGVD INPMAVEMAK LSLWLVSMDP KRPFTFLDDR
LASGDSLLGI TSLEQLEYMH MDPKQGRKIH ERGLVDFTRG VRVLIGRAAE SRRKLSKMDG
ATMDGVNRKR SVLGETELET GQARLLADLV VGAALSSVGK SEAIARDQAL KAADLARRLN
TAEPEARITA KKWLDTDRPN GAFERKPLHW PLAFPEVFEN GGFDAVIGNP PFLGGPKIRP
TLGGQYRELI TEVIAKGTRA TNTDLVAYFA LQAHRVVNKE GQAGIIATNT LTQGATRRVG
LDQIIESGVL IRGAIKSESW PSRSAALEYC VAWTTKKSLE KDSIVLADGV ATATITATLD
ASTSKKKPAH KLAKNAKVSF LGHHVNGKGF ILTPQEASYL LSTEDNNSEV VFPYLIGQDI
ADSPTSSPSR WIINFHDWSE EKSKKYKDPF QKVDSLVKPE RLKRNRESHR KYWWRYADYR
RGLESSISSL DRIIAFARVS KTTAPVMVPT GQVFSEQIVV LASDDTAMLA LLSSTSHYWW
AITRASTLET RIRYTPSDVF ETFAMPELTQ ELRDLGDRLD TYRRDVMLSR NTGLTKTYNL
VFDPACNDSD IVELRAIHRA IDEATIRAYG WEDRIEAVSG LDHGFHKVGR ETRYTIGPAA
QREVLDSLLE LNHERYAEEV AQGLHDKKGK RKSAAQEGTL FDV