Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_2628 |
Symbol | |
ID | 9246479 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 3135354 |
End bp | 3136001 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003680551 |
Protein GI | 297561577 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 7 |
Fosmid unclonability p-value | 0.0076105 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATCACCG TCGAGAAGCT CACCAAGTCC TTCGGCTCCC GCGTGCTGTG GCGGGACCTG GAGCTGACCG TGGAGGCCGG GCGGATGCTG GCCCTGGTGG GCGCCAGCGG CTCGGGAAAG ACCACCCTGC TCAACTGCAT GGGGCTGCTG GAGAGGCCCA GCGCGGGCCG GATCCTCTTC GAGGGCACCG ACATCACCCG TCTGGGGCCG GGCGGGCAGC GGCGCTTCCG CGCCGACAGG CTCGGCTACC TGTTCCAGAA CTACGCCCTG GTGGAGAGCG TGTCCGTCCG GGCCAACCTC GACATCGTCA AGCGGTACGG CACCAGGTCG CGCCAGGCCG CGGCGCTGGA GCGGGTGGGC CTGGCGGGAC GGGAGCAGGA GAAGGTGCAC CGGTTGTCCG GCGGTGAGCA GCAGCGCGTG GCGCTGGCCC GCGTGCTGGT CAAGCAGCCC TCCCTGGTGC TGGCCGACGA GCCCACCGGC GCCCTGGACC ACGACAACGG CGCGATGGTC GTGGAGGTGC TGCGCCAGCT GAGCCGGGAG GGCTGCGCGG TGGTGATCGC CACGCACGAC GACGCCGTCC GGGACGCGTG CGACGCCGCC TTCGACGTGG GCGCGGGGCG GGAAGCGGAC GCGACCGGCG GCCGGTAG
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Protein sequence | MITVEKLTKS FGSRVLWRDL ELTVEAGRML ALVGASGSGK TTLLNCMGLL ERPSAGRILF EGTDITRLGP GGQRRFRADR LGYLFQNYAL VESVSVRANL DIVKRYGTRS RQAAALERVG LAGREQEKVH RLSGGEQQRV ALARVLVKQP SLVLADEPTG ALDHDNGAMV VEVLRQLSRE GCAVVIATHD DAVRDACDAA FDVGAGREAD ATGGR
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