| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2586 |
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| Symbol | |
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| ID | 9246437 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_014210 |
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| Strand | - |
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| Start bp | 3078872 |
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| End bp | 3080683 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_003680510 |
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| Protein GI | 297561536 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.653336 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00337365 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | TTGACCACCG ACCACCACAC AGGCGCGGCG CCCTCGCGGC GCCGCGGACG CCGCCGGACG
ACCGCGACCC TGGCCGCGGG CACGGCCGCG GCGCTGCTGC TGGCCGCCTG CGGGGGCGCG
GACGGAGGCG GGGGCGAAGG CGGCCCGGTC GACGCCGAGT TCAACCAGGG CGAGACCGAG
GTGGTCAACC CCTCCGACCA GACCGGCGGC ACCCTGCGCT ACGCCATCTC CTCGGACTTC
GACTCACCCG ACCCCGGCAA CACCTACTAC GCGTTCGGCT GGAACTTCAG CCGCTACTAC
GCGCGCACCC TGCTCACCTA CGTCGGGGCG CCCGGCGCGG AGGGCACCGA ACTCCAGCCC
GACCTGGCCG CGGAGATGCC CAGGCCCAAC GAGGACCTCA CCGAGTGGAC GGTGCCCATC
AAGCAGGGGC TGCGCTACGA GGACGGCTCC GAGATCACCG CGCCCGACAT CGAGTACGCC
ATCGCGCGCG GCAACTTCGG CGCCCAGGCC CTGCCCAACG GCCCCAAGTA CTTCCAGGAC
CTGCTGGCCG ACAGCGACGA CTACGAGGGC CCCTACGCCG ACGAGGACGA CCCGCTGGCC
GGGTTCGACG GGATCGAGAC CCCCGACGAC CACACCCTGG TCTTCCACCT CAAGGACCCC
TTCGCGGAGT TCCCGTACCT GCTCATCCAG CCGCAGACCG CGCCGGTCCC GCCCGAGGCC
GACCGCGGTG AGCAGTACCA GAGCCGCGTC GTCTCCTCCG GGCCCTACAA GTTCGACGGC
GAGTACCGGC CCGGCGTCTC CCTGAACCTG GTGCGCAACG ACCAGTGGGA CCCCGCCACC
GACCCGACCC GCGAGGCGCT GCCGGACCGG GTCGAGGTGC AGCTGGGAGT GGACCAGAAC
GAGATCGACC AGCGCCTGGC CAGCGGCGAC CTGGACGTGG ACCTGGCCGG GGCCGGGGTG
GGACCCGCCA TGCGGGGCAC CCTGCTCACC GACGAGGCGC GCAAGAACAG CGTGGACAAC
CCGCAGAGCA ACACGCTGCG CTACGTCAAC ATCAGCACCG TCCTGGAACC CCTGGACGAC
CTGGCCTGCC GTGAGGCGGT CATGTACGCG GCCGACCGCG ACGCCCTCCA GCGGGCCTGG
GGCGGCGACA CCGGCGGCGA CATCGCCACC CAGATCATGC CCGCGTCGCT GCCGGGGGCC
GATCCCGGCA TCGACCTGTA CCCCTCACAG GACAACCAGG GCGACCTGGA CAAAGCCCGG
CAGAAGCTGG AGGAGTGCGG CGAGCCCGAC GGGTTCTCCA CCTCCATCGG CGTCCGGGCC
GACCGGCCCT CCGAGGTGAG CACCGCCGAG GCGCTCCAGC AGGCCCTGGC CAGGGTGGGC
ATCGAGACGC GGATCAAGCA GTACCCCTCG GACACCTACA CCAACACCCA GGCCGGGTCG
CCGTCCTTCG TGGAGGACAA CGACCTGGGC CTGACCGTGT ACGGGTGGGC CCCGGACTGG
GCGAGCGGCT ACGGCTTCAT GAGCAAGATC CTGGACGGCG ACGCCATCCA GGACGCGGGC
AACGCCAACA TCTCGGAGCT GGACGACGAG CGGATCAACG GCTGGTTCGA CGAGGTCATC
ACCGTGCGGG ACCCCGAGGA GCGCGCCTCG ATCTACACCC GGATCGACCG GCGGGCGATG
GAGCAGGCGG CGATCCTGCC CGCGGTGTTC GAGCGCACGG TGCTCTACCG GCCGCCGAAC
CTGACCAACG TGTACTACCA CTCGGGCTAC TCCATGTACG ACTACATGGC GCTCGGCACC
ACCCGGGAGT GA
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| Protein sequence | MTTDHHTGAA PSRRRGRRRT TATLAAGTAA ALLLAACGGA DGGGGEGGPV DAEFNQGETE
VVNPSDQTGG TLRYAISSDF DSPDPGNTYY AFGWNFSRYY ARTLLTYVGA PGAEGTELQP
DLAAEMPRPN EDLTEWTVPI KQGLRYEDGS EITAPDIEYA IARGNFGAQA LPNGPKYFQD
LLADSDDYEG PYADEDDPLA GFDGIETPDD HTLVFHLKDP FAEFPYLLIQ PQTAPVPPEA
DRGEQYQSRV VSSGPYKFDG EYRPGVSLNL VRNDQWDPAT DPTREALPDR VEVQLGVDQN
EIDQRLASGD LDVDLAGAGV GPAMRGTLLT DEARKNSVDN PQSNTLRYVN ISTVLEPLDD
LACREAVMYA ADRDALQRAW GGDTGGDIAT QIMPASLPGA DPGIDLYPSQ DNQGDLDKAR
QKLEECGEPD GFSTSIGVRA DRPSEVSTAE ALQQALARVG IETRIKQYPS DTYTNTQAGS
PSFVEDNDLG LTVYGWAPDW ASGYGFMSKI LDGDAIQDAG NANISELDDE RINGWFDEVI
TVRDPEERAS IYTRIDRRAM EQAAILPAVF ERTVLYRPPN LTNVYYHSGY SMYDYMALGT
TRE
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