Gene Ndas_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2562 
Symbol 
ID9246413 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp3053703 
End bp3055052 
Gene Length1350 bp 
Protein Length449 aa 
Translation table11 
GC content76% 
IMG OID 
Productisochorismate synthase 
Protein accessionYP_003680487 
Protein GI297561513 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.208593 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCACCC CGGCCACCAC GGCCGATACC GGACACACCG CCCCAGACGA GGTTCTAGAC 
TCGGGGACCG TGAACGCCCT CCTGAGCCCG CCACGCCTGT CCGTCCGCAC CGTCGCCCTG
CGCGACGACA CCGCCAGCCT GGTGCACCGC CTGCCCGCGG ACTCCCCCCT GGCCTGGCTG
ACCGGCGACG AGGGCGTCGT GGGCTGGGGA CAGGCCGCGC GGCTGGACCT GGACGGTGAG
CCCGAATCGG CCGAGCCCAC CGACACCACC CGCTTCACCG AGGCGGCCCG CTGGGTCGAC
GCCCTCACCG AGCGCGCCGA GGTCCACGAC GAGGTGGGGG TGCCCGGCAC CGGCCCGGTC
GCGTTCGGCA CGTTCGCCTT CTCCCCCTCC TCCGCGGGAT CGGCCCTGGT GGTGCCGCGC
GTGCTGGTCG GGCGGCGCGG CGGCCGCTCC TGGCTGACCA CCGTCACCGA AGCGTCCGGG
GCGCACCCGG CCGAGCCGCT CGGCCCGACG CCGGAGCCGC GGCCCGTCGG TCCGCTCTCC
TGGAGCGCGG GGTCGCTGAC CGGCGAGCAG TGGATGGGCG CCGTGGCCGG TACCGTCGAG
CGCATCCGCA CGGGAGAGCT CGACAAGGCC GTGCTGGCGC GCGACGCCCT GGCCGAGGCC
GACGCCCCCA TCGACGTGCG CACCCTGCTG GAGCGGCTGC GGCTGCGGTT CCCCGGTTGT
TTCACCTTCT CGGTGGACGG CATGGTCGGA GCCACCCCCG AGCTGCTGCT GCGCCGCGAG
GGCGACCAGC TCTCCTCGCT GGTGCTGGCC GGGACCCGCC CCCGGGGCGA GGACCCCGAC
GCGGACCGGC TCCTGGCCGA GGAGCTGCTG ACCTCGGCCA AGGACGTGGA CGAGCACCGC
ATGGCCGTGG AGTCCCTGCG CACCGCGCTG GAACCGCTCA CCGAGGAACT GGACGTGCCC
GCCCGGCCCC GCCTGCTCGC GCTCGCCAAC GTGCAGCACC TGGCCACGCC GGTGCGCGCC
CGCCTGTCCC CCGGGGTCTC GGCGCTGGAG GCGGTCGCGG CCCTGCACCC CACCGCCGCC
GTGGGCGGCA CCCCCACCGC GGCGGCCATG CGGCTGATCG CGAAGGCCGA GGGCATGGAC
CGGGGCGGCT ACGCCGGTCC GGTCGGGTGG CTGGACGGCG CGGGCAACTC CGAGTGGGGC
ATCGCCCTGC GCTGCGCCCG CGTGGAGGGC GCGCGCGCCC GGCTCTTCGC CGGAGGGGGC
ATCGTCGCCC AGTCCGAACC GGAGTCGGAG CTGGCCGAGA CCGAGTCCAA GTTCCGGGTG
ATGCGCGAGG CCCTCACCGA CCCCGTCTGA
 
Protein sequence
MRTPATTADT GHTAPDEVLD SGTVNALLSP PRLSVRTVAL RDDTASLVHR LPADSPLAWL 
TGDEGVVGWG QAARLDLDGE PESAEPTDTT RFTEAARWVD ALTERAEVHD EVGVPGTGPV
AFGTFAFSPS SAGSALVVPR VLVGRRGGRS WLTTVTEASG AHPAEPLGPT PEPRPVGPLS
WSAGSLTGEQ WMGAVAGTVE RIRTGELDKA VLARDALAEA DAPIDVRTLL ERLRLRFPGC
FTFSVDGMVG ATPELLLRRE GDQLSSLVLA GTRPRGEDPD ADRLLAEELL TSAKDVDEHR
MAVESLRTAL EPLTEELDVP ARPRLLALAN VQHLATPVRA RLSPGVSALE AVAALHPTAA
VGGTPTAAAM RLIAKAEGMD RGGYAGPVGW LDGAGNSEWG IALRCARVEG ARARLFAGGG
IVAQSEPESE LAETESKFRV MREALTDPV