Gene Ndas_2248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2248 
Symbol 
ID9246098 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2691257 
End bp2692924 
Gene Length1668 bp 
Protein Length555 aa 
Translation table11 
GC content74% 
IMG OID 
Productfumarate reductase/succinate dehydrogenase flavoprotein domain protein 
Protein accessionYP_003680176 
Protein GI297561202 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.826896 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.613804 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTAGCA GCGGAGACGA CCGCGCCGAC GTCATCGTCG TCGGCGCCGG GCTCGCGGGC 
CTGACCGCGG CCGCCGAACT GGCCGACGCG GGCAGGAGCG TGCTCCTGCT GGACCAGGAG
CCCGAGCAGT CCCTGGGCGG CCAGGCGTTC TGGTCCTTCG GCGGGCTGTT CCTCGTGGAC
TCCCCCGAGC AGCGGCGCAT GGGCATCAGG GACTCCGCCG AGCTGGCCAT GCAGGACTGG
ACGGGCACGG CGGGGTTCGA CCGCCCCGAG GACGCCTGGC CCCGCCGGTG GGCCGAGGCC
TACGTGGACT TCGCCGCCGG GGAGAAGCGC TCCTGGCTGC ACCGGCAGGG GATACGGTTC
TTCCCCCTCG TGGGCTGGGC CGAGCGCGGC GGCTACCTGG CCGACGGCCA CGGCAACTCC
GTGCCCCGGT TCCACATCAC CTGGGGCACC GGCCCGGGCG TGGTCGCGCC GTTCGAGCGG
CGGGTGCGCG CGGCGGCCGA GCGCGGCCTG GTCTCACTGC GCTTCCGCCA CCGGGTGGAC
GAACTGGTGG TCACGGGCGG GACGGTCACC GGCGTGCGCG GCGCGGTCCT GGCCCCCAGC
GGCGTCAGGC GGGGCGAGGC CAGCGGACGC GAGGCGGTGG GCGACTTCGA GTTCTCCGCC
CAGGCGGTGA TCGTCACCTC CGGCGGAATC GGCGCCAACC ACGACCTGGT GCGCCGCAAC
TGGCCCGAGC GCCTGGGCAC CCCGCCCGAG CACATGCTCT CGGGGGTGCC CGAGCACGTG
GACGGGCGCA TGCTGGCCAT CACCGAACGG GCGGGCGGGC GGATCGTCAA CCCCGACCGC
ATGTGGCACT ACACCGAGGG CATCCAGAAC TGGGACCCCG TCTGGGCCCG GCACGGCATC
CGCATCCTGC CGGGGCCCTC CTCGCTGTGG CTGGACGCGA CCGGCAAACG GCTGCCCGCG
CCCTACTTCC CCGGGTTCGA CACCCTGGGG ACCCTGGAGC ACATCATGCG CAGCGGCCAC
GAGTACACGT GGTTCGTGCT CTCGCAGAGG ATCATCGAGA AGGAGTTCGC CCTGTCGGGG
TCGGAGCAGA ACCCCGACCT GACCGGCAAG GACCTCGGGC TCGTCCTCAA GCGGGTGCTG
CCGGGCGCGC CGGGGCCGGT GGAGGCCTTC AAGCGCAACG GCGCGGACTT CGCCGTCGCC
GGCCGGCTGC CCGAGCTGAT CCGGAGGATG AGGGAGATCG CGGGCGACGG CGTGCTCGAC
GCCGACACCG TCACCCGCGA GGTGGTGGCC CGCGACCGGG AGATGGTCAA CACCTTCACC
AAGGACCTCC AGGTGACGGC GATCCACGGG GCGCGCAACT ACCGGGGCGA CCGCCTGGCC
CGGGTGGCGT CCCCGCACCA GATCCTGGAC CCCAAGGCGG GCCCGCTGAT CGCGGTGCGC
CTGCACGTGC TCACCCGCAA GTCCCTGGGC GGCCTGCACA CCGACCTGGA CGCCCGCGTG
CTGCGCGCGG ACGGCACGCC GCTGCCGGGG GTGTACGCCG CGGGCGAGGT CGCCGGGTTC
GGCGGCGGCG GGGTGCACGG CTACCGGGCG CTGGAGGGCA CCTTCCTGGG CGGCTGCCTG
TTCTCGGGCC GCACGGCCGG TCGGGCCGCC GCGGCGGCGC TGGGCTAG
 
Protein sequence
MGSSGDDRAD VIVVGAGLAG LTAAAELADA GRSVLLLDQE PEQSLGGQAF WSFGGLFLVD 
SPEQRRMGIR DSAELAMQDW TGTAGFDRPE DAWPRRWAEA YVDFAAGEKR SWLHRQGIRF
FPLVGWAERG GYLADGHGNS VPRFHITWGT GPGVVAPFER RVRAAAERGL VSLRFRHRVD
ELVVTGGTVT GVRGAVLAPS GVRRGEASGR EAVGDFEFSA QAVIVTSGGI GANHDLVRRN
WPERLGTPPE HMLSGVPEHV DGRMLAITER AGGRIVNPDR MWHYTEGIQN WDPVWARHGI
RILPGPSSLW LDATGKRLPA PYFPGFDTLG TLEHIMRSGH EYTWFVLSQR IIEKEFALSG
SEQNPDLTGK DLGLVLKRVL PGAPGPVEAF KRNGADFAVA GRLPELIRRM REIAGDGVLD
ADTVTREVVA RDREMVNTFT KDLQVTAIHG ARNYRGDRLA RVASPHQILD PKAGPLIAVR
LHVLTRKSLG GLHTDLDARV LRADGTPLPG VYAAGEVAGF GGGGVHGYRA LEGTFLGGCL
FSGRTAGRAA AAALG