Gene Ndas_2131 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_2131 
Symbol 
ID9245981 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2550717 
End bp2551583 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content75% 
IMG OID 
ProductABC transporter integral membrane protein 
Protein accessionYP_003680061 
Protein GI297561087 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGACCT CCACCACGAC CGGGCAGCCC CCGGCCCCCT CCGCCGACCG CGCCCCCGGC 
CCGGCCCGGG CCCTGTCCGA CCTGGCCGCG GCCGCCTCGG CCGAGTGGGT CAAGCTCCGC
TCGGTGCGCT CCACCTGGTG GGGCCTGGCC GCGGCCCTGC TGCTCATGGC CGTGGTGGCG
CCGGGCGCGG CGGTCTCGAC CGTCGGCAAC ATGCAGAACG GGAACCTGCC GACCGCCGAG
ATCCCGGCGT CGGAGATGGC GGTCTACGCC GCCGTGTGGG CCGTGCAGTT CGCCGTCATC
GCCGTGGCGC TTCCGGTGAT CACCTCCGAG TACTCCTCCC GCTCCATCCA CCCCACCCTC
CAGGCGGTCC CGGTGCGGGT GCGCGTGCTC GCGGCGAAGG CCCTGGCCGT GGCCGCCACC
GTGTTCGCGG CGTCGCTGGT GACGGGGGCG GTCGGTACGC TTCTGGCGCA CCTGGTGATG
CGGCACCCCT ACCTGGAGGG GTACGGCACC CTGGACCCGG GGCAGGCCGC CGCGGACGTG
GTGCGCACGG CCGTGTACCT GACCGCCGTG GCCGTGGCCA CCGTGGGGGT CGGCTCCGCG
CTGCGGTCGG CCGCCGCGGC GCTGACCACG GTGTTCATGC TGATTCTGGG CCTGCCGGTG
ATGTTGTTGC TGATGGGCAG CGAGGTGGGT GTCTACCTCG CCGGGCGCAT GCCGTTCCTC
GCCGGGATCT CGTTCGTGGA CAGCGCCTTC GTGATCGGGC GGTTCGACCA CGCGCTCACG
CCCGCCGCGG GCGGCGCGGT GCTCGTGTAC TGGACCGCGG CGAGCCTGGC GGCGGGCGCC
CTGGTGCTCC GGCTCCGGGA CGCCTGA
 
Protein sequence
MTTSTTTGQP PAPSADRAPG PARALSDLAA AASAEWVKLR SVRSTWWGLA AALLLMAVVA 
PGAAVSTVGN MQNGNLPTAE IPASEMAVYA AVWAVQFAVI AVALPVITSE YSSRSIHPTL
QAVPVRVRVL AAKALAVAAT VFAASLVTGA VGTLLAHLVM RHPYLEGYGT LDPGQAAADV
VRTAVYLTAV AVATVGVGSA LRSAAAALTT VFMLILGLPV MLLLMGSEVG VYLAGRMPFL
AGISFVDSAF VIGRFDHALT PAAGGAVLVY WTAASLAAGA LVLRLRDA