| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2033 |
|---|
| Symbol | |
|---|
| ID | 9245883 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2453700 |
|---|
| End bp | 2455007 |
|---|
| Gene Length | 1308 bp |
|---|
| Protein Length | 435 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 72% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003679965 |
|---|
| Protein GI | 297560991 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.359306 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAACCACA CCACCCCACG CAGGTACGCG ATCGTCGGCA CCGGATCCCG CGCCCGGATG
TACACCCGGG CCCTGACCGG CACCCACCGG GACCGGGGAC GTCTGGTCGC CCTCTGCGAC
ACCAACAGCA CCCGCATGGC CGTGCACAAC CGCATCGTCA CCGACGCCGG GCTCGACGCC
GTGCCGACCT ACTCCCCAGA CGACTTCGTC CGCATGCTCA AGGAGGAGAG GGTCGACGAG
GTCATCGTCT GCACCGTCGA CCGCACCCAC GCCGACTACG TCGTGGCGGC CCTGGACGCC
GGACTCGACG CCATCACCGA GAAGCCCATG ACCGCCGACC TGGAGGGGCT GCGGCGCATC
AACGAGGCCC AGGAGCGCAC CGGGGGGCGG GTGACCGTCG GCTTCAACTA CCGCTACAAC
CCCGTCCACC GCCAGCTGCG CGACCTCATC GCCTCCGGGG TGATCGGCGA GGTCGGGTCG
GTGCACTTCG AGTGGCTGCT GGACCTGCGC CACGGCGCCG ACTACTTCCG CCGCTGGCAC
CGCGACAAGA CCCAGTCCGG CGGCCTGCTC GTGCACAAGG CCAGCCACCA CTTCGACCTG
GTCAACTGGT GGATCGGCGC CCGCCCCACC GACGTGTTCG CGTCGGGGAG GCTGTTCTTC
TACGGCGACG ACAACGGCCG CCGCCACGGC CTGGCCGCCG ACTACGAGCG CGGCCACGGC
GAGGACGCCG CCCAGAGCGA CCCCTTCGCC CTGCACATGG ACGACAGCGC CGACCTCAGG
GCCCTGTACC TGGACGCCGA GCACGAGGAC GGCTACCGGC GCGACCTCAA CGTCTTCGGA
CCCGGCATCA CCATCGAGGA CGACATGTCC GTGCTGGTCG GCTACGACAC CGGTGCGCGC
CTGACCTACC ACCTGGTCGC CTACGCGCCC TGGGAGGGGT ACCGGATCGC GATCACCGGC
AGCCGGGGGC GCCTGGAGCT GGACATGACC GAGTTCGAGT ACACCTCGCC CGAGCAGGAC
GAGACCACGC CCGTGCGCGG CATGCCCGCC CCCAAGGAGC ACACCAGCGC ACGGCTGTGG
CTGCGCCGCC ACTGGCAGCC CCCCGAGGAG ATCCCCGTGG CGGTGGGCGA GGGCACCCAC
GGCGGCGGCG ACCAGCTCAT GCTCGACTCG CTGTTCGGCG GCGAGGACGA CGGCATCCGC
CCCGACCACT CCGACGGCGG CAACGCCCTG CTCACCGGGC TGGCGGCCAA CGCCTCCATC
GCCTCGGGGG CGCCGGTCCG CGTCGCCGAC CTGCTCGGGG GCAGCTGA
|
|---|
| Protein sequence | MNHTTPRRYA IVGTGSRARM YTRALTGTHR DRGRLVALCD TNSTRMAVHN RIVTDAGLDA
VPTYSPDDFV RMLKEERVDE VIVCTVDRTH ADYVVAALDA GLDAITEKPM TADLEGLRRI
NEAQERTGGR VTVGFNYRYN PVHRQLRDLI ASGVIGEVGS VHFEWLLDLR HGADYFRRWH
RDKTQSGGLL VHKASHHFDL VNWWIGARPT DVFASGRLFF YGDDNGRRHG LAADYERGHG
EDAAQSDPFA LHMDDSADLR ALYLDAEHED GYRRDLNVFG PGITIEDDMS VLVGYDTGAR
LTYHLVAYAP WEGYRIAITG SRGRLELDMT EFEYTSPEQD ETTPVRGMPA PKEHTSARLW
LRRHWQPPEE IPVAVGEGTH GGGDQLMLDS LFGGEDDGIR PDHSDGGNAL LTGLAANASI
ASGAPVRVAD LLGGS
|
|---|
| |