| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_2017 |
|---|
| Symbol | |
|---|
| ID | 9245867 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2437398 |
|---|
| End bp | 2438552 |
|---|
| Gene Length | 1155 bp |
|---|
| Protein Length | 384 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | oxidoreductase domain protein |
|---|
| Protein accession | YP_003679949 |
|---|
| Protein GI | 297560975 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.183817 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGATC ACGTGCTGGG TGTCGCCATG AACGGCGTCA CCGGACGCAT GGGGTACAGG
CAGCACCTGA CCCGGTCTGT CCTGGCCATC CGGGAGGCGG GCGGCGTACG CCTGCCCGAC
GGCTCCCGGA TCATTCCCGA GCCCGTCCTG GTCGGACGCT CCGAGCACAA GCTGCGCGAG
ATCGCCGAAC GCCACGGAAT CGAGCGCTGG TCCACCGACC TGGACGGTGT GCTCTCCGAC
GACGACATCA CGGTCTACTT CGACTCGCAG ATCACACACG CCCGCGAGGC CGCCGTGCGC
GCGGCCATCG CCGCGGGCAA GCACGTCTAC GTCGAGAAGC CCACCGCCAG CACGCTCAGC
GCCGCCCTGG AGCTGGCCAA ACTGGCCCGC GACGCGGGCG TGCGCAACGG CGTGGTCCAG
GACAAGCTCT TCCTGCCCGG CCTGCTCAAA CTGCGCAGGC TGGTCGAGAG CGGCTTCTTC
GGCCGGATCC TGTCGGTGCG CGGCGAGTTC GGCTACTGGG TCTTCGAGGG CGACTGGCAG
CCCGCCCAGC GCCCCAGCTG GAACTACCGC GCCGAGGAGG GCGGCGGCAT GGTGCTGGAC
ATGTTCCCGC ACTGGCACTA CATCCTGGAG CACCTGTTCG GCCCGGTGCG CGCGGTCACC
GCCAAGGTGG CCACCCACAT CCCGCGCCGC TGGGACGAGG AGGGACGGCC CTACGAGGCC
ACGGCCGACG ATTCCGCCTA CGGCATCTTC GAGCTGGACG GCGGCGTCAT CGCCCAGATC
AACTCCTCCT GGAACGTGCG CGTGGCCCGC GACGAACTCG TGGAGTTCCA GGTCGACGGC
ACCCACGGCA GCGCCGTGGC GGGACTGCGC TCCTGCCGCG CCCAGCACCG CTCGGCCACG
CCCAAGGCGG TCTGGAACCC CGACCTGGAG GACCTGGGGC GCTACCGGGA GCAGTGGGAG
CCGGTGCCCG ACAACACCGA GTTCCCCAAC GGGTTCCGCG CCCAGTGGGA GGACTTCCTG
CGCCACGTGG TCCTGGACAC CCCCTTCCCG CACGACCTGC TCTCGGGCGC GCGCGGCCTC
CAGATGGCCG AGGCCGGACT CCAGTCGGCG CGCACCGGCC GCACGATCGA ACTGGACGAG
GTCACCCTCG CATGA
|
|---|
| Protein sequence | MGDHVLGVAM NGVTGRMGYR QHLTRSVLAI REAGGVRLPD GSRIIPEPVL VGRSEHKLRE
IAERHGIERW STDLDGVLSD DDITVYFDSQ ITHAREAAVR AAIAAGKHVY VEKPTASTLS
AALELAKLAR DAGVRNGVVQ DKLFLPGLLK LRRLVESGFF GRILSVRGEF GYWVFEGDWQ
PAQRPSWNYR AEEGGGMVLD MFPHWHYILE HLFGPVRAVT AKVATHIPRR WDEEGRPYEA
TADDSAYGIF ELDGGVIAQI NSSWNVRVAR DELVEFQVDG THGSAVAGLR SCRAQHRSAT
PKAVWNPDLE DLGRYREQWE PVPDNTEFPN GFRAQWEDFL RHVVLDTPFP HDLLSGARGL
QMAEAGLQSA RTGRTIELDE VTLA
|
|---|
| |