| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1953 |
|---|
| Symbol | |
|---|
| ID | 9245803 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2376914 |
|---|
| End bp | 2377882 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF58 |
|---|
| Protein accession | YP_003679886 |
|---|
| Protein GI | 297560912 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.534202 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 7 |
|---|
| Fosmid unclonability p-value | 0.00411343 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | GTGAACGCAC CCGCCATCGG TACCGACCCC CGGCTGCGCG CCGCGCTGCG CCGTCTGGAC
CTGCGCATCG TGCACCGCCT GGAGGGGCTG CTGCACGGTG AGCACCTCGG GCTGCGCCTG
GGGCCCGGCT CGGAGGCGGC CGAGGCGCGC CTGTACCAGC CGGGCGAGGA CGACGTGCGG
CTCATGGACT GGTCGGTGAC CGCGCGCACC GACACCCCGC ACGTGCGCGA CCTGGTCGCC
GACCGCGAGC TGGAGAGCTG GACCCTGCTG GACCTGTCGC CGAGCATGGA CTTCGGCACG
GGCCTGCGCT CCAAGCACGA GGTGGCGGTC GGGGCGATGG TCGCGGCCAA CCTCCTCACC
CAGCGGGTGG GCGACCGCTT CGGCGCCCAC TTCCTGCACC GGGGCACGAT CCGGCGCTGG
CCCGCGCGTT CGGGCAAGGA GGCCCTGCTG GCGCTGTTGG CCACGGTGGC CGCGGCGCCG
ACCGGTGACG AGCGCGAGCC CTCGCCGCAC CGGGCGTCCC TGGCAGACGC CATCGGTGAC
CTGGTGCGGG TGCGCCGCAG GCGCGGCCTG CGGGTGGTGA TCTCCGACTT CCTGGACACC
CCCGCCTTCG GCGGCGAGGT GACCTGGGAG CGCCCCCTGC GCCAGTTGGC CGCGCGCCAC
CAGGTGCTGG TGGTGGAGGT GATCGATCCG CGCGAGCTGG ACGTGCCCGA GGTGGGCGAC
GTGACGCTGC GCGATCCGGG CACGGGCATG GTGCGCGACG TGCGGCTGAC GCGGGCGGTG
CGCGAGCGCT ACCGTCAGGC GGCCGAGGGG CAGCGCCGCG CGGTGCGCGA CGCGCTGCGC
CGGTGCGGGG TGCACCACCT GATGCTAAGG ACGGACCGGG ACTGGGTACT GGATACGGCA
CGCTTCGTTA TCCACCAGAG GCGTACCGCG CACCACCTGG CCCGCCACAC TCCGGGAACG
CCCCGGTGA
|
|---|
| Protein sequence | MNAPAIGTDP RLRAALRRLD LRIVHRLEGL LHGEHLGLRL GPGSEAAEAR LYQPGEDDVR
LMDWSVTART DTPHVRDLVA DRELESWTLL DLSPSMDFGT GLRSKHEVAV GAMVAANLLT
QRVGDRFGAH FLHRGTIRRW PARSGKEALL ALLATVAAAP TGDEREPSPH RASLADAIGD
LVRVRRRRGL RVVISDFLDT PAFGGEVTWE RPLRQLAARH QVLVVEVIDP RELDVPEVGD
VTLRDPGTGM VRDVRLTRAV RERYRQAAEG QRRAVRDALR RCGVHHLMLR TDRDWVLDTA
RFVIHQRRTA HHLARHTPGT PR
|
|---|
| |