Gene Ndas_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1946 
Symbol 
ID9245796 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2370247 
End bp2370822 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content70% 
IMG OID 
Producttranscriptional regulator, TetR family 
Protein accessionYP_003679879 
Protein GI297560905 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.173435 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00972871 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCAACGC GCGATCCCGA CCGCAAACGG CAGCAGTTGA TGGAAGCGGC CCTGGCCGAG 
TTCGCCGAGT ACGGCGTGGC CGGCGCCCGG GTGGACCGGC TCGCCAAACG CGCCGGTATC
AGCCCCGGCC TCGTGTACTC GTTCTTCGCC GGAAAGGAGG GCCTGTTCGA GGCCGTCCAC
GAGGCGATCG TCGAGCAGAC GGTGGGCGCC GTGCCCATCG ACGCCGACGA CCTGCCCGGA
TACGCCGGCC GCCTGCACGA CGCCGCGGCA CAGCACCCGC AGGTCATGCG GTTCCTCACG
TGGTACGCGC TCGAACGCGC CGAACGACCG GTCTCCGAGA TCGTCGCCCG CTCCGTGGAC
GAGAAGATCA CGGCCATCGA GGCGGCACAG CGGAGCGGCA CCGTCAGATC CGACAGACCG
GCCGGTGAGA TCCTCGCCCT GGTCCTGACG CTGGCCAACA TGTGGCAGCA CCGCACCGAG
GACGTCAGCC ACCTCGTCAC CGACGCGCAG CGACGCACTA TCATCACCGA CGCCGTACGC
CGCCTGGTCG CACCGGAGGA GTCCCCTCGT GGTTGA
 
Protein sequence
MATRDPDRKR QQLMEAALAE FAEYGVAGAR VDRLAKRAGI SPGLVYSFFA GKEGLFEAVH 
EAIVEQTVGA VPIDADDLPG YAGRLHDAAA QHPQVMRFLT WYALERAERP VSEIVARSVD
EKITAIEAAQ RSGTVRSDRP AGEILALVLT LANMWQHRTE DVSHLVTDAQ RRTIITDAVR
RLVAPEESPR G