Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1946 |
Symbol | |
ID | 9245796 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | - |
Start bp | 2370247 |
End bp | 2370822 |
Gene Length | 576 bp |
Protein Length | 191 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003679879 |
Protein GI | 297560905 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.173435 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.00972871 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCAACGC GCGATCCCGA CCGCAAACGG CAGCAGTTGA TGGAAGCGGC CCTGGCCGAG TTCGCCGAGT ACGGCGTGGC CGGCGCCCGG GTGGACCGGC TCGCCAAACG CGCCGGTATC AGCCCCGGCC TCGTGTACTC GTTCTTCGCC GGAAAGGAGG GCCTGTTCGA GGCCGTCCAC GAGGCGATCG TCGAGCAGAC GGTGGGCGCC GTGCCCATCG ACGCCGACGA CCTGCCCGGA TACGCCGGCC GCCTGCACGA CGCCGCGGCA CAGCACCCGC AGGTCATGCG GTTCCTCACG TGGTACGCGC TCGAACGCGC CGAACGACCG GTCTCCGAGA TCGTCGCCCG CTCCGTGGAC GAGAAGATCA CGGCCATCGA GGCGGCACAG CGGAGCGGCA CCGTCAGATC CGACAGACCG GCCGGTGAGA TCCTCGCCCT GGTCCTGACG CTGGCCAACA TGTGGCAGCA CCGCACCGAG GACGTCAGCC ACCTCGTCAC CGACGCGCAG CGACGCACTA TCATCACCGA CGCCGTACGC CGCCTGGTCG CACCGGAGGA GTCCCCTCGT GGTTGA
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Protein sequence | MATRDPDRKR QQLMEAALAE FAEYGVAGAR VDRLAKRAGI SPGLVYSFFA GKEGLFEAVH EAIVEQTVGA VPIDADDLPG YAGRLHDAAA QHPQVMRFLT WYALERAERP VSEIVARSVD EKITAIEAAQ RSGTVRSDRP AGEILALVLT LANMWQHRTE DVSHLVTDAQ RRTIITDAVR RLVAPEESPR G
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