Gene Ndas_1833 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1833 
Symbol 
ID9245683 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand- 
Start bp2240533 
End bp2241561 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content78% 
IMG OID 
ProductUspA domain protein 
Protein accessionYP_003679767 
Protein GI297560793 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0847869 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.369126 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGAGGCCC GCCCCGCGGC CGTGTGCGGC ACGCCCGCCC CGGTCCCGGG GAGCGGGCCG 
GGGCGGACCG GGCGGGACTC GCCCGGAAAC CGGGAGCGGC CGCTCCGGGA GCCCTTCCTG 
GTGATGATGG TGGGTGACGC GGTGGTGACG AGACCAGTGG AGGTTGTCAT GGAGCGGTCG 
GTCCTCGTCG GGGTGGATGG TTCCGATGAG AGCCTGCGGT CGGTGGAGTG GGCCGCGGCG 
GAGGCCGCCC GGCGGCACTG CCGCCTGCGG ACGCTCACGG CCCTCCCCGC GCCGTCGCCG 
GACGCGGCCT TCGTCTGGCC CGAGGAGGAG ATCCGCGCGA GCGCGCGCGC CGTCCTGGAC 
CTGGCCGAGG AACGCGCGTC GGCCGCGGCC CCCGGTACGG CCGTGGACCG GGAGGTGGTG 
ATGGACTCCC CCGGCCGGGC GCTGCTGGAG CGCGCGGGGC AGGACGGGAC GGCCCTGGTG 
GTCGTCGGGC ACAGGGGGCG CGGCGGGTTC TCGGGGCTGA GGGTGGGGTC GGTGGCCTAC 
CGCGTGGCCG CGCAGTCGTC GGTGCCGGTC GTCGTGGTGG GGCCGCGGCC CGCGGCCGAC 
GCCAGCGCCG AGGTGGTGGT GGGGGACGAC GGGTCGGCCC GCGCGGAGCG GGTCGTGGCC 
GAGGCGTTCG AGGCAGCCTC CACCGGGGGC GGGCCGCTGC GCGTCGTGCG GGTCCGGGAG 
TCGGCGCTGC CGTTCCTTCC CCCCGCGGTC GCGTCGTCTC CCCGGGCCCG GGAGAGCGGC 
CCAGGCGATG GACTCGCCCT GGAGCGCGCG GTCGGGCCCC TCCGTGCCCG GTACCCGGAG 
GTGGAGGTGC GCACCGAGGT GGTGGACGGC CGCCCCGTCG CGGCGCTGAC GGACGCGGCG 
CGAGCAGCGC GGCTGCTCGT GGTCGGGGCG GGAGGCGAGC ACGGACTGAC CCGCCTGGCC 
CTGGGTTCGG CGGCCCACGG GGTACTGCAC CGCTCCCCCT GCCCCGTCAT GGTGGTCCAC 
ACAGGTTGA
 
Protein sequence
MEARPAAVCG TPAPVPGSGP GRTGRDSPGN RERPLREPFL VMMVGDAVVT RPVEVVMERS 
VLVGVDGSDE SLRSVEWAAA EAARRHCRLR TLTALPAPSP DAAFVWPEEE IRASARAVLD 
LAEERASAAA PGTAVDREVV MDSPGRALLE RAGQDGTALV VVGHRGRGGF SGLRVGSVAY 
RVAAQSSVPV VVVGPRPAAD ASAEVVVGDD GSARAERVVA EAFEAASTGG GPLRVVRVRE 
SALPFLPPAV ASSPRARESG PGDGLALERA VGPLRARYPE VEVRTEVVDG RPVAALTDAA 
RAARLLVVGA GGEHGLTRLA LGSAAHGVLH RSPCPVMVVH TG