Gene Ndas_1787 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNdas_1787 
Symbol 
ID9245637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNocardiopsis dassonvillei subsp. dassonvillei DSM 43111 
KingdomBacteria 
Replicon accessionNC_014210 
Strand
Start bp2185308 
End bp2185964 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content69% 
IMG OID 
ProductProtein of unknown function DUF2174 
Protein accessionYP_003679721 
Protein GI297560747 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.337101 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGGACA AGACCGACTT CAAGAAAACC CTTGACGCCT ACCGGGCGCG ACGGGGCCGG 
TTCCGGATCA CGCACGTGCC GGACCTGAGC TACCTCATGG TCGACGGCCA CGGTGACCCC
AACACCTCAC CGGCCTTCAC CGAGGCGGTC GAGGCGCTCT ACCCGGTGGC CTACAAGCTC
AAGTTCGCCA GTAAGCGCGA CCTCGGCCGC GACTACGTGG TCATGCCCCT GGAGGGCCTG
TGGTGGGCCG AGGACATGGA CGCCTTCACG GCGGCGCGCG ACAAGTCGCG GTGGGACTGG
ACGATGATGA TCATGGTCCC GGACTGGACC GACCAGGACA TGTTCGCCGC CGCCGTGGAG
CAGGTCGCCG CGAAGAACAG GCCCGCGCGC CTGGACGACG TCCGCCTGGA GACGCTGTCC
GAGGGCCTCT GCGTGCAGAC GCTGCACGTC GGCTCCTTCG ACGACGAGGC CGACGTTCTC
CGGCGGATGC ACCACGAGTT CGTCCCCGAC AACGGGCTGC GCATGGTCGG CAGGCACCAC
GAGATCTACC TCAGCGACTT CCGCAGGGCC GCGCCGGACA AGCTGCGCAC CATCCTGCGG
CAGCCGGTCG CCGCCGTCTC CGGGAGCGGG GCCGGGCCCG CCGCCTCGGA CGGGTGA
 
Protein sequence
MTDKTDFKKT LDAYRARRGR FRITHVPDLS YLMVDGHGDP NTSPAFTEAV EALYPVAYKL 
KFASKRDLGR DYVVMPLEGL WWAEDMDAFT AARDKSRWDW TMMIMVPDWT DQDMFAAAVE
QVAAKNRPAR LDDVRLETLS EGLCVQTLHV GSFDDEADVL RRMHHEFVPD NGLRMVGRHH
EIYLSDFRRA APDKLRTILR QPVAAVSGSG AGPAASDG