| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1778 |
|---|
| Symbol | |
|---|
| ID | 9245628 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | + |
|---|
| Start bp | 2176656 |
|---|
| End bp | 2177219 |
|---|
| Gene Length | 564 bp |
|---|
| Protein Length | 187 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | protein of unknown function DUF461 |
|---|
| Protein accession | YP_003679712 |
|---|
| Protein GI | 297560738 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.321055 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGTA CACAGGCTGA CAGGCGACGT AACGCACGCC GCGCCGCACC GGCCGCCCTG
GGGGTGCTGC TGTGCGTCAC CGCGTGCGGG GGCGGACCGG GCGCCTCCGG GGAGACGGCC
TCCGCCGCTC CCGCGAGTGA GCGGGGCCGG GCCGAGGCCG GGCACCTGCT GGTGACGGAG
GCCTGGATGC CCGAACCGGC CAACCCGGAG GTGGGGGTGG TCTACCTGCG CGTGTCCAAC
TCGGGGGAGT CGGACGACGC CGTCACGGGG GTGTCCACCG ACGCCTCCGA CGACGCCGAC
CTGTGCAGTA CCGAGACCAC CGACTCCGGG GCCGCGCGCA TGCGGGTCGT GGAGGAGATC
CCGGTTCCGG CCGGGGGAGC GACCACCCTG GTCGAGGGCG GCTACCACGT CATGGTCAAC
GACCTGCCCG AAGCGCCCGT CGTCGGGGAC GAGGTCACCG TCACCCTCTC CTTCGCCAGC
GAGGAGGAGC TGGCGGTCAC CGTCCCGGTG GAGCCGATGA CCGCGGAGAG CGAGGACGGC
GGCTCCGAAC ACGAGCACCA CTGA
|
|---|
| Protein sequence | MPRTQADRRR NARRAAPAAL GVLLCVTACG GGPGASGETA SAAPASERGR AEAGHLLVTE
AWMPEPANPE VGVVYLRVSN SGESDDAVTG VSTDASDDAD LCSTETTDSG AARMRVVEEI
PVPAGGATTL VEGGYHVMVN DLPEAPVVGD EVTVTLSFAS EEELAVTVPV EPMTAESEDG
GSEHEHH
|
|---|
| |