| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1760 |
|---|
| Symbol | |
|---|
| ID | 9245610 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 2146590 |
|---|
| End bp | 2147690 |
|---|
| Gene Length | 1101 bp |
|---|
| Protein Length | 366 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 80% |
|---|
| IMG OID | |
|---|
| Product | NAD-dependent epimerase/dehydratase |
|---|
| Protein accession | YP_003679694 |
|---|
| Protein GI | 297560720 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.122533 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.00990126 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACCCGCG TGGGCGTACT CGGCGCCGCG GGGGCGGTCG GTTCCGCGCT GCTGGCGCGG
CTGGCCGGTA CCGGGGCGCG CCTGACGGCG GGCGTGCGCG ACCCCGGCCG CCTGTCCGGC
CCTCCCCCCG GGGCGGCCGT GCGCGTGGTC GACGCCGAGG ACCCCGCGGG GCTGGCGGAG
TTCTGCGCCT CCCACGACGT GGTGGTCAAC TGCGCGGGCC CCTCCGCGCT CCTGGGGGAC
CGGGTCCTGC GGGCCGCGAC CGCGTCCGGC GCCCACTACG TCTCGGTGGG GGACGACGGA
CGCGACCACC TCTCCCCCGC GGGACCGGAC GACCCCGGCC CGGCGCCGGG CCGCTGCGCC
CTGCTGGGGG CGGGCCTGCT GCCGGGGCTG AGCACACTGC TGCCCCGCGT GCTGGCCGAC
GGCTTCGACC GGGTGACGGA CATGACAGTC CACTCCGGCG GCCTGGAGCG CTTCACCCCG
GCGGCCGCGC GCGACTACGT CGCGGGGCTG GCCTCCGGCG CGGACCGCTC GCTGGCGGCC
TGGCGCGGCC GCCGTGTCGC GGGCGCCCTG CGGCCCGAGG CGGACGCGCG GCTGCCCTTC
CTGCCCCGGC CCGTGTCCCT GCACCCCTTC CTGAGCCCCG AGGCCGAACG CCTGGCACGC
GCCCTGTCCC TGGAGCGCCT GGACTGGTGG CACGTCTTCG AGGGGACGCG CACCACCGAC
GCGCTCGCCG GGACGCGGGG CCGGGGCGTC ACCGACCCCG ACGCCCTGGC GGACCTGCTC
GTGCGCGCCT CCGGCCTGGA GGTGTTCGGC CGCACCCAGT ACCAGGCGCT GGTGCTGCGG
GCCGGGGGCC GGATCGGCGG CCGTGAGCGC ACCCGGGTCC TCGCGCTCAC CGGCGCGGGT
CCGGCCCTGA GCGCCGAGGC CGCGGCCCTG GCGGTGCGGT TCGCGGCCGG GGGCGGGGCG
GCGGACGGAA CGCACTGGGC GGGCGAGGCG CTGCCGACCG CCGGGGTCCT CGACGGCCTG
CGGGACGCGC CCGGCGTCGC GTTCCTGCGC CTCACCGACG ACGATGACGC GCACTCCGGA
GTCGAGGAGG GGGTCCTGTG A
|
|---|
| Protein sequence | MTRVGVLGAA GAVGSALLAR LAGTGARLTA GVRDPGRLSG PPPGAAVRVV DAEDPAGLAE
FCASHDVVVN CAGPSALLGD RVLRAATASG AHYVSVGDDG RDHLSPAGPD DPGPAPGRCA
LLGAGLLPGL STLLPRVLAD GFDRVTDMTV HSGGLERFTP AAARDYVAGL ASGADRSLAA
WRGRRVAGAL RPEADARLPF LPRPVSLHPF LSPEAERLAR ALSLERLDWW HVFEGTRTTD
ALAGTRGRGV TDPDALADLL VRASGLEVFG RTQYQALVLR AGGRIGGRER TRVLALTGAG
PALSAEAAAL AVRFAAGGGA ADGTHWAGEA LPTAGVLDGL RDAPGVAFLR LTDDDDAHSG
VEEGVL
|
|---|
| |