Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ndas_1594 |
Symbol | |
ID | 9245444 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
Kingdom | Bacteria |
Replicon accession | NC_014210 |
Strand | + |
Start bp | 1951561 |
End bp | 1953366 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | |
Product | ABC transporter related protein |
Protein accession | YP_003679529 |
Protein GI | 297560555 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.172161 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.191174 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCACGC CGGTGGAGGA CTCCGCGAGC GAACACGGGG AACTGCTCCC CACCGCCTCG GCCCGCCGCA CGTGGGCCGT GCTGGGCGAG GGGGTGCGCG GCACCGGCTG GGGCGCCCCG CTTGCCCTGG CCACCGTGCT CGCGGGCAGC GCCGCCGGAC TGGTCGCCCC CTGGGTGCTG GGCCGGATGG TCGACGACAT CTCGGCGCAG CGGGGGCTGG ACACCGTCCT GTCCTCGGTC CTGCTCATCG CCGGGGCGGG GCTGCTCGGC GGCCTGCTCA CGGGTGTGGG CAGCTGGCTG GTCAGCCGGG TCGGCGAGAC CGTCCTGGCC CGCCTGCGCG AAAGCGTCAT GGACCGCGTG CTGCGCATGC CCGCCGCCCG CCTGGAGCGG GTGCGCATCG GCGACCTGCT CTCCCGGGTC GGCGACGACG TCGCCGTGGT CACCGCCAGC ATCGCCCGCA GCGGCCCCGA CGCGGTCGTG GCCCTGGCCA CCGTCCTGCT GACCGCGGTG GGCATCACCG CCCTGGACTG GCGCCTGGGC CTGGCCGCGA TGCTGTGCGT GCCGGTCTAC GTGACGGCCG TGCGCTGGTA CCTGCCCCGT TCGGGCCCCT ACTACGCCCG CGAGCGCGTG GCCATGGGCG AGCGCTCGCA CGCGATGATG GGAGCCCTGC GCGGGCGTTC CGCCGTGCGC GCCTACCGCC TGGAGGACGA GCACGAGTCC CGGGTGCGCG ACCGCTCGGC CGCCGCCATG GACATCACGG TGTCGGTGTT CCGGCTGTTC ACCCGCTTCG GGTCGCGGCT CAACGCCGCC GAGTGCGTCG GACTGACCTC GGTGCTGGTG GCCGGGTTCT GGCTGGTGCG CGCCGACCTG GCCAGCGTCG GCATGGTCAC CGCCGCCGCC CTGTACTTCC ACCGCCTGTT CGGCCCGCTG ATCTTCCTGG TCATGAACTT CAACGAGGTG CAGTCGGCCG GGGCGAGCCT GGCCCGTCTG GCCGGCGTGG TCGACCTCCC GGTGGAGGCC GACCCGGGCG CGGAGGAGGG CCCGGCCGGT TCCTCGGTCC GCGTCGCGGG GGTCACCCAC TCCTACGGCA GCGGCGGCCC GGCCGCGCTG GAGGAGGTGT CGCTGGAGGT CGCCCCGGGT GAGCGCGTGG CCCTGGTCGG GGCCAGCGGC GCGGGCAAGA CCACGCTGGC CGCCCTGGTC AGCGGCCTGC GCACGCCCAC GACCGGAACC GTGTACCTGG GCGGGATCCC CCTGGAGGAG CTGGGGGAGC GGCGGGTGCG CGAGCACGTC TTCCTCGTCA GCCAGGAGAC CCACGTGTTC GCCGGAACCC TGCTGGAGGA CCTGCGCCTG GCCCGCGCCG GGGCCGACGC GGCCGAGGCG GAGGCCGCCC TGGAGGCCGT CGGCGCCCTG GAGTGGGTGC GCGCCCTGCC CGAGGGACTG GACACGGTGG TCGGCGAGGG CGGGCACGCC CTGACCGCCG AGCAGGCCCA GCACCTGGCA CTGGCCCGGC TGGTGCTGGC CGACCCGGAC GTGGCCGTCC TGGACGAGGC CACCGCCGAG GCGGGCAGTT CCGGCGCCCG GCGACTGGAG CGCGCCGCCG CCGCGGCCAC CGCCGGGCGC ACCACGCTGG TGGTGGCGCA CCGGCTGACC CAGGCGCAGA CCGCCGACCG CGTGGTGGTC ATGGACCGGG GCCGCGTCGT CGAGCAGGGG ACGCACGCCG AGCTGGTCGC CGCCGGGGGG CGCTACGCCG ACCTGTGGCG CAGCTGGCGG GGCGCGCCGG ACGACGGGGA GCCGCTCTCC CGCTGA
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Protein sequence | MSTPVEDSAS EHGELLPTAS ARRTWAVLGE GVRGTGWGAP LALATVLAGS AAGLVAPWVL GRMVDDISAQ RGLDTVLSSV LLIAGAGLLG GLLTGVGSWL VSRVGETVLA RLRESVMDRV LRMPAARLER VRIGDLLSRV GDDVAVVTAS IARSGPDAVV ALATVLLTAV GITALDWRLG LAAMLCVPVY VTAVRWYLPR SGPYYARERV AMGERSHAMM GALRGRSAVR AYRLEDEHES RVRDRSAAAM DITVSVFRLF TRFGSRLNAA ECVGLTSVLV AGFWLVRADL ASVGMVTAAA LYFHRLFGPL IFLVMNFNEV QSAGASLARL AGVVDLPVEA DPGAEEGPAG SSVRVAGVTH SYGSGGPAAL EEVSLEVAPG ERVALVGASG AGKTTLAALV SGLRTPTTGT VYLGGIPLEE LGERRVREHV FLVSQETHVF AGTLLEDLRL ARAGADAAEA EAALEAVGAL EWVRALPEGL DTVVGEGGHA LTAEQAQHLA LARLVLADPD VAVLDEATAE AGSSGARRLE RAAAAATAGR TTLVVAHRLT QAQTADRVVV MDRGRVVEQG THAELVAAGG RYADLWRSWR GAPDDGEPLS R
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