| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1564 |
|---|
| Symbol | |
|---|
| ID | 9245414 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1915380 |
|---|
| End bp | 1915859 |
|---|
| Gene Length | 480 bp |
|---|
| Protein Length | 159 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | |
|---|
| Product | transcriptional regulator, MarR family |
|---|
| Protein accession | YP_003679499 |
|---|
| Protein GI | 297560525 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0866699 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCACCACG ACGACGAGCA CACCGAAAAC GCGGACGCCG GGGACGGCCG GGGCCCCGAT
GTCGCCCACC TCCTGGTCCG CCTCCTCAAC ATCAGCCAGC GGATCGGGCG CTACGCCGCG
CACGAGACCG GTGAGCGCAC GTCCCCGGCG ACATGGCGCG CGCTGAGCGT GCTCCAGGAG
AAGGGGCCGC TGCGGCTGGG CGTCCTGGCC GAGCACTGCC GGGTCAGGCA GCCGACCATG
ACGGTGATCG TGGAGTCGCT GCTCTCCTCC GGGTACGTGG CGCGCAGTCC CGACCCCGAC
GACCGGCGGG CCCAGCTGCA CGAGCTGACC CTGGCGGGCG CGGCGGCGCT GGAGGACTGG
CGGCAACGGA TCGGCGACGC GCTGGAGCCG CTGTTCTCCG ACCTGTCCGC GCGCGAGCGG
GAGCTGCTGT CGGAGTCGGT GCGGCTGCTG GACGAGCGGC TGCGCCGCGG CGGGGCCTGA
|
|---|
| Protein sequence | MHHDDEHTEN ADAGDGRGPD VAHLLVRLLN ISQRIGRYAA HETGERTSPA TWRALSVLQE
KGPLRLGVLA EHCRVRQPTM TVIVESLLSS GYVARSPDPD DRRAQLHELT LAGAAALEDW
RQRIGDALEP LFSDLSARER ELLSESVRLL DERLRRGGA
|
|---|
| |