| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_1563 |
|---|
| Symbol | |
|---|
| ID | 9245413 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 1913871 |
|---|
| End bp | 1915145 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 75% |
|---|
| IMG OID | |
|---|
| Product | major facilitator superfamily MFS_1 |
|---|
| Protein accession | YP_003679498 |
|---|
| Protein GI | 297560524 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.0974748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTGGCGA AGACCGACAC CCCGCGTACA GCACCGCCCG GAGGCGCGGA CCAGGGACAC
GCGCCGGAGG GTTCCATCCT CCGGCAGCCG CGCGCCGTGT GGGCCGTGGC GTTCGCCTGC
GTGATCGCCT TCATGGGCAT CGGCCTGGTC GACCCGATCC TGCCCGCGAT CTCCCGCAGC
CTGGAGGCCA CGCAGACCCA GACCTCGCTG CTGTTCACCA GCTACCTGCT GGTCACCGGC
CTGGCCATGC TCGTCACCAG CTGGGTGTCG AGCCGCCTGG GCGCCAAGCG CACCCTGCTG
GTCGGCCTGG CGCTGATCGT GGTCTTCGCC GCCGCGGCCG GGGCCAGCGG CAGCGTCGAG
TCCGTCATCG GCTTCCGGGC CGGGTGGGGA CTGGGCAACG CGTTCTTCAT CTCCACCGCC
CTGGCCACCA TCGTCGGCGC CGCCAGCGGC GGGGCCTCCT CCGCGATCGT GCTCTACGAG
GCGGCGCTGG GCCTGGGCAT CGCCGCGGGC CCGCTCCTGG GCGGACTGCT CGGCAGCGTC
AGCTGGCGCG GCCCCTTCTT CGGTACCGCC GCGCTGATGG CGGTCGGGTT CGTCGCGATC
GCCGTCCTGC TCAGGAGCGA CGCCGCGGAG CGGACCGCGC CGGTGCCGCT GTCGGCCCCG
TTCGCGGCGC TGCGCGTCCC GGGCATCCTG GTGCTGGCCC TGGCCGCGCT GTTCTACAAC
ATCGGGTTCT TCGCCCTGCT GGCCTACACG CCCTTCCCGC TGGGGCTGGA CGAGATGGGC
CTGGGGTTCA CCTTCTTCGG CTGGGGCCTG GCGGTCGCCG TGACCTCGGT CTTCGTGGCT
CCGGTGCTCA CCCGCCGGTG GCCGCGCACG CGGGTGCTGT GGGCGACCCT GCTCCTGCTG
GCCGCGGACC TGGTCGCCGC GGGCGCGCTC ATCTCGTCCA CGGCGGGGCT GATCACCGCC
ATCGTGCTGG GCGGCCTGCT GCTGGGCGTG CTCAACACGG TGCTGACCGA GTGCGTGATG
GAGGCCAGCG ACCTGCCGCG TTCGGTGGCG TCCTCGTCCT ACTCGGCGGT GCGCTTCCTC
GGCGGCGCCG CCGCTCCCCC GGCCGCCTCC GCGCTCGCCG CGGCCCTGTC CCCCGGCGCG
CCGATGTACG CGGCGGCGGT GTCCGTGGCG CTGGCCGCGG GGATCGTGCT CCTGGGCCGC
GGGGCGCTGC GCAGGGTGGA CAACGGCCCC GAGTCCGCCC GGGCCGAGGC CGAGGCGATC
ACGCTGGGCG AGTGA
|
|---|
| Protein sequence | MVAKTDTPRT APPGGADQGH APEGSILRQP RAVWAVAFAC VIAFMGIGLV DPILPAISRS
LEATQTQTSL LFTSYLLVTG LAMLVTSWVS SRLGAKRTLL VGLALIVVFA AAAGASGSVE
SVIGFRAGWG LGNAFFISTA LATIVGAASG GASSAIVLYE AALGLGIAAG PLLGGLLGSV
SWRGPFFGTA ALMAVGFVAI AVLLRSDAAE RTAPVPLSAP FAALRVPGIL VLALAALFYN
IGFFALLAYT PFPLGLDEMG LGFTFFGWGL AVAVTSVFVA PVLTRRWPRT RVLWATLLLL
AADLVAAGAL ISSTAGLITA IVLGGLLLGV LNTVLTECVM EASDLPRSVA SSSYSAVRFL
GGAAAPPAAS ALAAALSPGA PMYAAAVSVA LAAGIVLLGR GALRRVDNGP ESARAEAEAI
TLGE
|
|---|
| |